RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Pde1aQ61481 565 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Capn11Q6J756 714 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ckap2lQ7TS74 745 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Slxl1Q9D515 155 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Atp5hQ9DCX2 161 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tsc1Q9EP53 1161 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Dlc1Q9R0Z9 1092 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm45194A0A140LJG2 572 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vmn2r72D3Z4N8 856 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Zfp42P22227 288 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mmp13P33435 472 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Prim2P33610 505 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Il1rapl1P59823 695 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Arl4cP61208 192 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Olfm3P63056 478 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Klhdc9Q3USL1 350 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Pla2g4cQ64GA5 597 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Senp6Q6P7W0 1132 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ccnt2Q7TQK0 723 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Creb3l2Q8BH52 521 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Pak4Q8BTW9 593 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Spns2Q91VM4 549 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Slc25a38Q91XD8 326 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 AenQ9CZI9 336 aaKnown RBP18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 1700013H16RikQ9DAC5 291 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 XkQ9QXY7 446 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ccdc175E9PVB3 822 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ccdc144bE9PVZ3 520 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm38392E9Q2A2 434 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Heatr4E9Q357 955 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Grpel2O88396 224 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Serpina1aP07758 413 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Serpina1cQ00896 412 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Serpina1dQ00897 413 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ddb1Q3U1J4 1140 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Brinp3Q499E0 766 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Msantd2Q6NZR2 559 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 C2cd5Q7TPS5 1016 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Yars2Q8BYL4 472 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Plekhh3Q8VCE9 796 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 CrygnQ8VHL5 183 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ap2b1Q9DBG3 937 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Abcb9Q9JJ59 762 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Stk32bQ9JJX8 414 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 IqccA2ADZ8 418 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 1700018F24RikB2RW27 314 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Dnase1l3O55070 310 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Sstr1P30873 391 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Uchl4P58321 233 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Fam91a1Q3UVG3 837 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 GnptabQ69ZN6 1235 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Q80ZQ3 298 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Usp1Q8BJQ2 784 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vps37bQ8R0J7 285 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 GcshQ91WK5 170 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Pdk3Q922H2 415 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Sppl3Q9CUS9 384 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Cd2bp2Q9CWK3 342 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Trmt10bQ9D075 318 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Zbed3Q9D0L1 228 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Lypla2Q9WTL7 231 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Myo5aQ99104 1853 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Zbtb11G5E8B9 1050 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vcam1P29533 739 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mthfd1lQ3V3R1 977 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gas7Q60780 421 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mxd3Q80US8 206 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Lonp1Q8CGK3 949 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Plcg2Q8CIH5 1265 aa18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Rbm5Q91YE7 815 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 IkQ9Z1M8 557 aaKnown RBP18.67■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Srpk1O70551 648 aaKnown RBP18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tspyl1O88852 379 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 St3gal1P54751 337 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Etv6P97360 485 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Fam172aQ3TNH5 417 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mier3Q3UHF3 551 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Kctd8Q50H33 476 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Grik5Q61626 979 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Nyap1Q6PFX7 833 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Q8BT18 775 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Osbpl6Q8BXR9 959 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Riox2Q8CD15 465 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Arhgef3Q91X46 524 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tmco1Q921L3 188 aaKnown RBP18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Q9CPS8 106 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm13023A2A8N2 498 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ppp1r36D3Z0R2 411 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ebf3O08791 596 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 PtgisO35074 501 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Adam15O88839 864 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 LxnP70202 222 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 R3hdm4Q4VBF2 262 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Btnl9Q8BJE2 536 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Elmo3Q8BYZ7 720 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Prkag2Q91WG5 566 aa18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Actr3Q99JY9 418 aaKnown RBP18.66■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ttc17E9PVB5 1198 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vmn2r103E9PWW0 856 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Shoc2O88520 582 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms