RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 KitP05532 979 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Tulp2P46686 562 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 GckP52792 465 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Psmc5P62196 406 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Rps6P62754 249 aaKnown RBP10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Stx2Q00262 289 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Zbtb14Q08376 449 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Phactr1Q2M3X8 580 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 GsapQ3TCV3 858 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Znf365Q8BG89 408 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Tmem161bQ8C2L6 487 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Arfip2Q8K221 341 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Vmn1r64Q8R2B8 320 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Trmt10bQ9D075 318 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gins2Q9D600 185 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 SynrgQ5SV85 1306 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Zc3h7aE9PWW6 970 aaKnown RBP10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gm21973F6WEZ7 68 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Mmp13P33435 472 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Rfx2P48379 717 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Lzts1P60853 599 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Crnkl1P63154 690 aaKnown RBP10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Kpnb1P70168 876 aaKnown RBP10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ppm1jQ149T7 507 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Nat8lQ3UGX3 299 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Garnl3Q3V0G7 1038 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Kif11Q6P9P6 1052 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Rnf139Q7TMV1 668 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 AmphQ7TQF7 686 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Arhgap24Q8C4V1 747 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 WaslQ91YD9 501 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Taf7lQ9D3R9 471 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Polr3cQ9D483 533 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Paip2Q9D6V8 124 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Sfmbt1Q9JMD1 863 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 Sh2d3cQ9QZS8 854 aa10.87□□□□□ -0.67
Clip3-201ENSMUST00000014065 InhbeO08717 350 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Itgb5O70309 798 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Csf1rP09581 977 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Uchl4P58321 233 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Rad54lP70270 747 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ttc39dQ0VF76 604 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ccdc127Q3TC33 260 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 9130409I23RikQ3TS87 320 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Fam8a1Q3URQ4 399 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Sult1d1Q3UZZ6 295 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Shroom1Q5SX79 823 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Cyp3a11Q64459 504 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 OcrlQ6NVF0 900 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Sh3tc2Q80VA5 1289 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ttc39bQ8BYY4 617 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Kdm1bQ8CIG3 826 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Pnpt1Q8K1R3 783 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 ItpkaQ8R071 459 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Tsc2Q61037 1814 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gm4846B2RWH8 538 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Cdr1E9Q0B4 517 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Irf8P23611 424 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Mmp14P53690 582 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Serping1P97290 504 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Hipk4Q3V016 616 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Stip1Q60864 543 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Orai3Q6P8G8 290 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gpatch2lQ6PE65 482 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 NostrinQ6WKZ7 506 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Pgrmc2Q80UU9 217 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Crybg3Q80W49 1005 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Znf618Q80YY7 953 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ipo5Q8BKC5 1097 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Dnali1Q8BVN8 258 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Adamts2Q8C9W3 1213 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 OafQ8QZR4 282 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Plekhg6Q8R0J1 787 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Tasp1Q8R1G1 420 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ddx39aQ8VDW0 427 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Sec63Q8VHE0 760 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Pomgnt1Q91X88 660 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Atad3Q925I1 591 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Rnf25Q9QZR0 456 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Clcn2Q9R0A1 908 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Mta2Q9R190 668 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Mettl1Q9Z120 268 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Srsf11E9Q6E5 511 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Galnt4O08832 578 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 PhbP67778 272 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gsdmc4Q3TR54 480 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Atp4aQ64436 1033 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Snx19Q6P4T1 997 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ccnt2Q7TQK0 723 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Snx30Q8CE50 437 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ago2Q8CJG0 860 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Trim66Q924W6 1242 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Ttc33Q9D6K7 262 aa10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 HnrnpcQ9Z204 313 aaKnown RBP10.86□□□□□ -0.67
Clip3-201ENSMUST00000014065 Pds5aQ6A026 1332 aa10.85□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gm29133A0A1B0GT72 266 aa10.85□□□□□ -0.67
Clip3-201ENSMUST00000014065 Gm3460E9QAI8 215 aa10.85□□□□□ -0.67
Clip3-201ENSMUST00000014065 C130060K24RikG3UWA8 416 aa10.85□□□□□ -0.67
Clip3-201ENSMUST00000014065 Tekt5G5E8A8 557 aa10.85□□□□□ -0.67
Clip3-201ENSMUST00000014065 Srpk1O70551 648 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms