RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Sh3rf3Q8C120 878 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Epn2Q8CHU3 595 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Sulf1Q8K007 870 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Alg9Q8VDI9 611 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Txndc9Q9CQ79 226 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tspan17Q9D7W4 270 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Htra2Q9JIY5 458 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Hic1Q9R1Y5 733 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Scn11aQ9R053 1765 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 EloblA6PWE0 161 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Xbp1O35426 267 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Zfp957Q3UT76 567 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Srek1ip1Q4V9W2 153 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Otud6aQ6IE21 290 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Acap2Q6ZQK5 770 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ccnt2Q7TQK0 723 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pih1h3bQ8C6P5 218 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Prpsap2Q8R574 369 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Stx12Q9ER00 274 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rnf14Q9JI90 485 aa13.39□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gm6370A0A0G2JGX9 315 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gm3371F7CQW8 167 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gm6309L7N481 315 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Bmpr2O35607 1038 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Alkbh1P0CB42 389 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rb1P13405 921 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Msh2P43247 935 aaKnown RBP13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 YwhaeP62259 255 aaKnown RBP13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Mettl17Q3U2U7 461 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Zdhhc24Q6IR37 284 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gpc5Q8CAL5 572 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Clip4Q8CI96 704 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ggt7Q99JP7 662 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 NonoQ99K48 473 aaKnown RBP13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Med21Q9CQ39 144 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Lrrc34Q9DAM1 415 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Ube4bQ9ES00 1173 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Fer1l6E0CZ42 1862 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Armc3A2AU72 881 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Fam71aB7XG49 585 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Kpnb1P70168 876 aaKnown RBP13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 rp9P97762 213 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Micall2Q3TN34 1009 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Trim75Q3UWZ0 467 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 R3hdm4Q4VBF2 262 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Hif1aQ61221 836 aaKnown RBP13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Adgrg6Q6F3F9 1165 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gga2Q6P5E6 603 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gprc5cQ8K3J9 440 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Vmn1r199Q8R280 367 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Asb11Q9CQ31 323 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tmed5Q9CXE7 229 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Myh15E9Q264 1925 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 EvplQ9D952 2035 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rnf19bA2A7Q9 732 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 IkbkgO88522 412 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Atp9bP98195 1146 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Sox10Q04888 466 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Klra3Q64329 266 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rccd1Q8BTU7 377 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Depdc1aQ8CIG0 804 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tfr2Q9JKX3 798 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tmod4Q9JLH8 345 aa13.38□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tbc1d16A2ABG4 766 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Slfn8B1ARD8 910 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tekt5G5E8A8 557 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Casp4P70343 373 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Calb2Q08331 271 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Togaram2Q3TYG6 1002 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Klra7Q60654 280 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Akap7Q7TN79 314 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rhpn2Q8BWR8 686 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 DolkQ8R2Y3 534 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Agap3Q8VHH5 910 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Nme3Q9WV85 169 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Bub1bQ9Z1S0 1052 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Pdzrn4E9PUZ9 1014 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Raph1F2Z3U3 1266 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Aoc3O70423 765 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Dync1i2O88487 612 aaKnown RBP13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 4930430A15RikQ05AC5 485 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Hace1Q3U0D9 909 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Stip1Q60864 543 aaKnown RBP13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Gstt2Q61133 244 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tdpoz2Q717B2 364 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tbc1d22bQ80VE5 505 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Adgra1Q8C4G9 578 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Fam20aQ8CID3 541 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Flvcr1B2RXV4 560 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Rnf113a2Q14B01 337 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 TdrkhQ80VL1 560 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Tubgcp5Q8BKN5 1024 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Klhl38Q8BSF5 581 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 PygbQ8CI94 843 aaKnown RBP13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Cd248Q91V98 765 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Q9D2Q3 444 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Heg1E9Q7X6 1337 aa13.37□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Nup98Q6PFD9 1816 aaKnown RBP13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Eddm13E9Q7F5 164 aa13.36□□□□□ -0.27
Clcn3-201ENSMUST00000004430 Klf6O08584 283 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms