RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W Q0017Q9ZZX8 53 aa-0.12□□□□□ -2.43
PRP39YML046W RHO1P06780 209 aaKnown RBP-0.12□□□□□ -2.43
PRP39YML046W YCR001WP25347 104 aa-0.12□□□□□ -2.43
PRP39YML046W RAD51P25454 400 aa-0.12□□□□□ -2.43
PRP39YML046W RPC19P28000 142 aaKnown RBP-0.12□□□□□ -2.43
PRP39YML046W MCH2P36032 473 aa-0.12□□□□□ -2.43
PRP39YML046W POP8P38208 133 aa-0.12□□□□□ -2.43
PRP39YML046W YSW1P38280 609 aa-0.12□□□□□ -2.43
PRP39YML046W PRM9P39551 298 aa-0.12□□□□□ -2.43
PRP39YML046W NSA1P53136 463 aaPredicted RBP-0.12□□□□□ -2.43
PRP39YML046W MRH4P53166 561 aa-0.12□□□□□ -2.43
PRP39YML046W BUD25P85052 153 aa-0.12□□□□□ -2.43
PRP39YML046W CYT2Q00873 224 aa-0.12□□□□□ -2.43
PRP39YML046W KAP95Q06142 861 aaKnown RBP-0.12□□□□□ -2.43
PRP39YML046W YNG1Q08465 219 aa-0.12□□□□□ -2.43
PRP39YML046W BTS1Q12051 335 aa-0.12□□□□□ -2.43
PRP39YML046W ILV1P00927 576 aaKnown RBP-0.13□□□□□ -2.43
PRP39YML046W DDI2P0CH63 225 aa-0.13□□□□□ -2.43
PRP39YML046W DDI3P0CH64 225 aa-0.13□□□□□ -2.43
PRP39YML046W STF2P16965 84 aa-0.13□□□□□ -2.43
PRP39YML046W STP22P25604 385 aa-0.13□□□□□ -2.43
PRP39YML046W RNP1P32385 249 aa-0.13□□□□□ -2.43
PRP39YML046W ECM31P38122 312 aa-0.13□□□□□ -2.43
PRP39YML046W DOG1P38774 246 aa-0.13□□□□□ -2.43
PRP39YML046W IRC22P40006 225 aa-0.13□□□□□ -2.43
PRP39YML046W AGX1P43567 385 aa-0.13□□□□□ -2.43
PRP39YML046W UBC4P15731 148 aa-0.14□□□□□ -2.43
PRP39YML046W CCA1P21269 546 aa-0.14□□□□□ -2.43
PRP39YML046W ADE1P27616 306 aa-0.14□□□□□ -2.43
PRP39YML046W AEP1P32493 518 aa-0.14□□□□□ -2.43
PRP39YML046W CSG2P35206 410 aa-0.14□□□□□ -2.43
PRP39YML046W SPC1P46965 94 aa-0.14□□□□□ -2.43
PRP39YML046W RPA34P47006 233 aaPredicted RBP-0.14□□□□□ -2.43
PRP39YML046W ALB1P47019 175 aaPredicted RBP-0.14□□□□□ -2.43
PRP39YML046W AIF1P52923 378 aa-0.14□□□□□ -2.43
PRP39YML046W NIF3P53081 288 aa-0.14□□□□□ -2.43
PRP39YML046W TOS8P53147 276 aa-0.14□□□□□ -2.43
PRP39YML046W ALG13P53178 202 aa-0.14□□□□□ -2.43
PRP39YML046W GET1P53192 235 aa-0.14□□□□□ -2.43
PRP39YML046W YDR391CQ04170 232 aa-0.14□□□□□ -2.43
PRP39YML046W CDC123Q05791 360 aa-0.14□□□□□ -2.43
PRP39YML046W SEI1Q06058 285 aa-0.14□□□□□ -2.43
PRP39YML046W YPR172WQ06608 200 aa-0.14□□□□□ -2.43
PRP39YML046W MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.14□□□□□ -2.43not detected
PRP39YML046W VAM10Q08474 114 aa-0.14□□□□□ -2.43
PRP39YML046W PST1Q12355 444 aa-0.14□□□□□ -2.43
PRP39YML046W GTT2Q12390 233 aa-0.14□□□□□ -2.43
PRP39YML046W IZH4Q99393 312 aa-0.14□□□□□ -2.43
PRP39YML046W AI5_BETAQ9ZZX0 354 aa-0.14□□□□□ -2.43
PRP39YML046W HIS1P00498 297 aaKnown RBP-0.14□□□□□ -2.43
PRP39YML046W RPL39P04650 51 aa-0.14□□□□□ -2.43
PRP39YML046W PTC1P35182 281 aa-0.14□□□□□ -2.43
PRP39YML046W SWD2P36104 329 aaPredicted RBP-0.14□□□□□ -2.43
PRP39YML046W ADH5P38113 351 aaKnown RBP-0.14□□□□□ -2.43
PRP39YML046W YHR022CP38763 256 aa-0.14□□□□□ -2.43
PRP39YML046W AST2P39945 430 aaKnown RBP-0.14□□□□□ -2.43
PRP39YML046W YGR168CP53293 376 aa-0.14□□□□□ -2.43
PRP39YML046W FMP41P53889 259 aaKnown RBP-0.14□□□□□ -2.43
PRP39YML046W VPS9P54787 451 aa-0.14□□□□□ -2.43
PRP39YML046W MRPS8Q03799 155 aa-0.14□□□□□ -2.43
PRP39YML046W SMT3Q12306 101 aaKnown RBP-0.14□□□□□ -2.43
PRP39YML046W KSH1Q8TGJ3 72 aa-0.14□□□□□ -2.43
PRP39YML046W CDC37P06101 506 aaKnown RBP-0.15□□□□□ -2.43
PRP39YML046W GPA2P10823 449 aa-0.15□□□□□ -2.43
PRP39YML046W GCD2P12754 651 aaPredicted RBP-0.15□□□□□ -2.43
PRP39YML046W GPI12P23797 304 aa-0.15□□□□□ -2.43
PRP39YML046W YKL162CP36052 402 aa-0.15□□□□□ -2.43
PRP39YML046W VPS51P36116 164 aa-0.15□□□□□ -2.43
PRP39YML046W SKG1P36169 355 aa-0.15□□□□□ -2.43
PRP39YML046W TEM1P38987 245 aa-0.15□□□□□ -2.43
PRP39YML046W GDI1P39958 451 aaKnown RBP-0.15□□□□□ -2.43
PRP39YML046W AIM19P40502 157 aa-0.15□□□□□ -2.43
PRP39YML046W OKP1P53298 406 aa-0.15□□□□□ -2.43
PRP39YML046W SUB1P54000 292 aaKnown RBP-0.15□□□□□ -2.43
PRP39YML046W PET191Q02772 108 aa-0.15□□□□□ -2.43
PRP39YML046W RCF1Q03713 159 aa-0.15□□□□□ -2.43
PRP39YML046W TAF9Q05027 157 aa-0.15□□□□□ -2.43
PRP39YML046W YLR297WQ05899 129 aa-0.15□□□□□ -2.43
PRP39YML046W BOP2Q06150 570 aa-0.15□□□□□ -2.43
PRP39YML046W YLR179CQ06252 201 aaKnown RBP-0.15□□□□□ -2.43
PRP39YML046W YPL119C-AQ3E751 87 aa-0.15□□□□□ -2.43
PRP39YML046W YMR316C-AI2HB70 103 aa-0.16□□□□□ -2.43
PRP39YML046W MGT1P26188 188 aa-0.16□□□□□ -2.43
PRP39YML046W HSP150P32478 413 aa-0.16□□□□□ -2.43
PRP39YML046W MGM101P32787 269 aaKnown RBP-0.16□□□□□ -2.43
PRP39YML046W SUI1P32911 108 aaKnown RBP-0.16□□□□□ -2.43
PRP39YML046W GAA1P39012 614 aa-0.16□□□□□ -2.43
PRP39YML046W YEL067CP39978 195 aa-0.16□□□□□ -2.43
PRP39YML046W EDC3P39998 551 aaKnown RBP-0.16□□□□□ -2.43
PRP39YML046W SNZ3P43545 298 aa-0.16□□□□□ -2.43
PRP39YML046W SNZ2P53824 298 aa-0.16□□□□□ -2.43
PRP39YML046W LSM3P57743 89 aaKnown RBP-0.16□□□□□ -2.43
PRP39YML046W YKR005CQ02203 525 aa-0.16□□□□□ -2.43
PRP39YML046W FUS2Q05670 677 aa-0.16□□□□□ -2.43
PRP39YML046W RRG8Q06109 277 aa-0.16□□□□□ -2.43
PRP39YML046W SLD7Q08457 257 aa-0.16□□□□□ -2.43
PRP39YML046W FIT3Q08907 204 aa-0.16□□□□□ -2.43
PRP39YML046W RTC6O14464 93 aa-0.16□□□□□ -2.44
PRP39YML046W MAK31P23059 88 aa-0.16□□□□□ -2.44
PRP39YML046W YEL028WP39989 153 aa-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 107.1 ms