RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C BLM10P43583 2143 aa2.52□□□□□ -2.01
ATG27YJL178C SCS7Q03529 384 aa2.52□□□□□ -2.01
ATG27YJL178C AIM36Q03798 255 aa2.52□□□□□ -2.01
ATG27YJL178C BNA7Q04066 261 aa2.52□□□□□ -2.01
ATG27YJL178C UTP15Q04305 513 aaKnown RBP2.52□□□□□ -2.01
ATG27YJL178C MRX8Q05473 314 aa2.52□□□□□ -2.01
ATG27YJL178C YLR283WQ05867 314 aa2.52□□□□□ -2.01
ATG27YJL178C PEX30Q06169 523 aa2.52□□□□□ -2.01
ATG27YJL178C MCH1Q07376 486 aa2.52□□□□□ -2.01
ATG27YJL178C FEX1Q08913 375 aa2.52□□□□□ -2.01
ATG27YJL178C FEX2Q08991 375 aa2.52□□□□□ -2.01
ATG27YJL178C ATP14Q12349 124 aa2.52□□□□□ -2.01
ATG27YJL178C TFB5Q3E7C1 72 aaPredicted RBP2.52□□□□□ -2.01
ATG27YJL178C ODC2Q99297 307 aa2.52□□□□□ -2.01
ATG27YJL178C TDH2P00358 332 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C DSF1P0CX08 502 aa2.51□□□□□ -2.01
ATG27YJL178C YNR073CP0CX09 502 aa2.51□□□□□ -2.01
ATG27YJL178C RPS16AP0CX51 143 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C RPS16BP0CX52 143 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C SEC22P22214 214 aa2.51□□□□□ -2.01
ATG27YJL178C MRS4P23500 304 aa2.51□□□□□ -2.01
ATG27YJL178C MEK1P24719 497 aaPredicted RBP2.51□□□□□ -2.01
ATG27YJL178C ACB1P31787 87 aa2.51□□□□□ -2.01
ATG27YJL178C ARO4P32449 370 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C PDC2P32896 925 aa2.51□□□□□ -2.01
ATG27YJL178C RRF1P38771 230 aa2.51□□□□□ -2.01
ATG27YJL178C RFC4P40339 323 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C GPI14P47088 403 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C CCC1P47818 322 aa2.51□□□□□ -2.01
ATG27YJL178C BXI1P48558 297 aa2.51□□□□□ -2.01
ATG27YJL178C JAC1P53193 184 aa2.51□□□□□ -2.01
ATG27YJL178C EOS1P53938 366 aa2.51□□□□□ -2.01
ATG27YJL178C YDR115WQ04598 105 aa2.51□□□□□ -2.01
ATG27YJL178C FSH2Q05015 223 aa2.51□□□□□ -2.01
ATG27YJL178C DCR2Q05924 578 aa2.51□□□□□ -2.01
ATG27YJL178C CTS2Q06350 511 aa2.51□□□□□ -2.01
ATG27YJL178C YPR147CQ06522 304 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C YLR031WQ07978 186 aa2.51□□□□□ -2.01
ATG27YJL178C MIM1Q08176 113 aa2.51□□□□□ -2.01
ATG27YJL178C RDL2Q08742 149 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C RTC5Q12108 567 aaKnown RBP2.51□□□□□ -2.01
ATG27YJL178C ATP16Q12165 160 aa2.51□□□□□ -2.01
ATG27YJL178C ATG31Q12421 196 aa2.51□□□□□ -2.01
ATG27YJL178C FLO9P39712 1322 aa2.5□□□□□ -2.01
ATG27YJL178C YAL064W-BO13512 126 aa2.5□□□□□ -2.01
ATG27YJL178C HEM4P06174 275 aa2.5□□□□□ -2.01
ATG27YJL178C ARG80P07249 177 aa2.5□□□□□ -2.01
ATG27YJL178C PUT1P09368 476 aa2.5□□□□□ -2.01
ATG27YJL178C RPL23AP0CX41 137 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C RPL23BP0CX42 137 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C MDH2P22133 377 aa2.5□□□□□ -2.01
ATG27YJL178C RPL16AP26784 199 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C PMT2P31382 759 aa2.5□□□□□ -2.01
ATG27YJL178C SUA5P32579 426 aa2.5□□□□□ -2.01
ATG27YJL178C FMT1P32785 401 aa2.5□□□□□ -2.01
ATG27YJL178C VAM7P32912 316 aa2.5□□□□□ -2.01
ATG27YJL178C TAF14P35189 244 aa2.5□□□□□ -2.01
ATG27YJL178C SRP102P36057 244 aaPredicted RBP2.5□□□□□ -2.01
ATG27YJL178C DAD2P36162 133 aa2.5□□□□□ -2.01
ATG27YJL178C FIG1P38224 298 aa2.5□□□□□ -2.01
ATG27YJL178C SSH1P38353 490 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C GRE3P38715 327 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
ATG27YJL178C CUP9P41817 306 aa2.5□□□□□ -2.01
ATG27YJL178C YHC3P47040 408 aa2.5□□□□□ -2.01
ATG27YJL178C TAD2P47058 250 aa2.5□□□□□ -2.01
ATG27YJL178C YJR111CP47148 283 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C RSM27P53305 110 aa2.5□□□□□ -2.01
ATG27YJL178C DID2P69771 204 aa2.5□□□□□ -2.01
ATG27YJL178C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
ATG27YJL178C RVB1Q03940 463 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C IRC19Q07843 230 aa2.5□□□□□ -2.01
ATG27YJL178C SYC1Q08553 188 aaPredicted RBP2.5□□□□□ -2.01
ATG27YJL178C YOR385WQ08909 290 aa2.5□□□□□ -2.01
ATG27YJL178C RTR2Q12378 196 aa2.5□□□□□ -2.01
ATG27YJL178C AIM45Q12480 344 aaKnown RBP2.5□□□□□ -2.01
ATG27YJL178C YHR214C-EQ8TGK0 99 aa2.5□□□□□ -2.01
ATG27YJL178C FSH3Q99369 266 aa2.5□□□□□ -2.01
ATG27YJL178C COX5BP00425 151 aa2.49□□□□□ -2.01
ATG27YJL178C TPI1P00942 248 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C YLL053CP0CD98 152 aa2.49□□□□□ -2.01
ATG27YJL178C MATALPHA1P0CY06 175 aa2.49□□□□□ -2.01
ATG27YJL178C HMLALPHA1P0CY07 175 aa2.49□□□□□ -2.01
ATG27YJL178C URA6P15700 204 aa2.49□□□□□ -2.01
ATG27YJL178C SEN2P16658 377 aa2.49□□□□□ -2.01
ATG27YJL178C DAL82P21705 255 aa2.49□□□□□ -2.01
ATG27YJL178C HXT2P23585 541 aa2.49□□□□□ -2.01
ATG27YJL178C KRR1P25586 316 aaPredicted RBP2.49□□□□□ -2.01
ATG27YJL178C YCR016WP25617 290 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C CDC39P25655 2108 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C MRP17P28778 131 aa2.49□□□□□ -2.01
ATG27YJL178C EHD3P28817 500 aa2.49□□□□□ -2.01
ATG27YJL178C VMA5P31412 392 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C EMP24P32803 203 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C SNC2P33328 115 aa2.49□□□□□ -2.01
ATG27YJL178C PAN3P36102 679 aaPredicted RBP2.49□□□□□ -2.01
ATG27YJL178C FRM2P37261 193 aa2.49□□□□□ -2.01
ATG27YJL178C UMP1P38293 148 aa2.49□□□□□ -2.01
ATG27YJL178C DLS1P40366 167 aa2.49□□□□□ -2.01
ATG27YJL178C AVT7P40501 490 aa2.49□□□□□ -2.01
ATG27YJL178C SYS1P41544 203 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms