RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	INP1	Q03694	420 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	PLP1	Q04004	230 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	PAL1	Q05518	499 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	SHH4	Q06236	168 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	IPP1	P00817	287 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	CSG2	P35206	410 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	ASK1	P35734	292 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	HYR1	P40581	163 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	IPI1	P38803	334 aa	Predicted RBP	4.01	□□□□□ -1.77
UBP7	YIL156W	AVT6	P40074	448 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	UFE1	P41834	346 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	YGR050C	P53231	118 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	RCF2	P53721	224 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	PKR1	Q03880	122 aa	Known RBP	4.01	□□□□□ -1.77
UBP7	YIL156W	HPT1	Q04178	221 aa	Known RBP	4.01	□□□□□ -1.77
UBP7	YIL156W	PBA1	Q05778	276 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	YPS3	Q12303	508 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	BBP1	Q12365	385 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	CDC7	P06243	507 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	YHI9	P38765	294 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	HMF1	P40037	129 aa	Known RBP	4.01	□□□□□ -1.77
UBP7	YIL156W	YLR179C	Q06252	201 aa	Known RBP	4.01	□□□□□ -1.77
UBP7	YIL156W	YPR202W	Q08993	238 aa		4.01	□□□□□ -1.77
UBP7	YIL156W	RMD6	P39975	231 aa		4	□□□□□ -1.77
UBP7	YIL156W	RRG9	P40156	214 aa		4	□□□□□ -1.77
UBP7	YIL156W	IRC24	P40580	263 aa		4	□□□□□ -1.77
UBP7	YIL156W	YGL262W	P53054	175 aa		4	□□□□□ -1.77
UBP7	YIL156W	SWT21	P53873	357 aa	Predicted RBP	4	□□□□□ -1.77
UBP7	YIL156W	IMP4	P53941	290 aa	Known RBP	4	□□□□□ -1.77
UBP7	YIL156W	EMI1	Q04406	187 aa		4	□□□□□ -1.77
UBP7	YIL156W	YPL257W	Q08974	193 aa		4	□□□□□ -1.77
UBP7	YIL156W	YLR361C-A	Q3E795	98 aa		4	□□□□□ -1.77
UBP7	YIL156W	YML108W	Q03759	105 aa		4	□□□□□ -1.77
UBP7	YIL156W	IRC25	Q07951	179 aa		4	□□□□□ -1.77
UBP7	YIL156W	ATG22	P25568	528 aa		4	□□□□□ -1.77
UBP7	YIL156W	TRM7	P38238	310 aa	Known RBP	4	□□□□□ -1.77
UBP7	YIL156W	GGC1	P38988	300 aa		4	□□□□□ -1.77
UBP7	YIL156W	SCW4	P53334	386 aa	Known RBP	4	□□□□□ -1.77
UBP7	YIL156W	YLR046C	Q12253	270 aa		4	□□□□□ -1.77
UBP7	YIL156W	FCY2	P17064	533 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	TRR2	P38816	342 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	YDR476C	Q03362	224 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	TIM22	Q12328	207 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	DSF1	P0CX08	502 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	YNR073C	P0CX09	502 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	YNL010W	P53981	241 aa	Known RBP	3.99	□□□□□ -1.77
UBP7	YIL156W	GPI17	Q04080	534 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	MBF1	O14467	151 aa	Known RBP	3.99	□□□□□ -1.77
UBP7	YIL156W	AAT2	P23542	418 aa	Known RBP	3.99	□□□□□ -1.77
UBP7	YIL156W	ELP3	Q02908	557 aa	Known RBP	3.99	□□□□□ -1.77
UBP7	YIL156W	YPL039W	Q03080	316 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	API2	Q04413	109 aa		3.99	□□□□□ -1.77
UBP7	YIL156W	NHP6A	P11632	93 aa	Known RBP	3.98	□□□□□ -1.77
UBP7	YIL156W	MAG1	P22134	296 aa	Known RBP	3.98	□□□□□ -1.77
UBP7	YIL156W	CNB1	P25296	175 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	YKL102C	P34249	101 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	YER189W	P40104	122 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	YJL028W	P47062	111 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	DID2	P69771	204 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	YPL225W	Q08971	146 aa	Known RBP	3.98	□□□□□ -1.77
UBP7	YIL156W	CCH1	P50077	2039 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	DYN2	Q02647	92 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	DGA1	Q08650	418 aa		3.98	□□□□□ -1.77
UBP7	YIL156W	ZRT3	P34240	503 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	TVP38	P36164	337 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	RPE1	P46969	238 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	ATG5	Q12380	294 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	TDA8	Q6B2U8	126 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	ARO8	P53090	500 aa	Known RBP	3.97	□□□□□ -1.77
UBP7	YIL156W	ACT1	P60010	375 aa	Known RBP	3.97	□□□□□ -1.77
UBP7	YIL156W	CSN9	Q03981	162 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	HTL1	Q9URQ5	78 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	TMA20	P89886	181 aa	Predicted RBP	3.97	□□□□□ -1.77
UBP7	YIL156W	SRL1	Q08673	210 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	RIB3	Q99258	208 aa		3.97	□□□□□ -1.77
UBP7	YIL156W	MRPS28	P21771	286 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	SFK1	P35735	353 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	REE1	P40893	198 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	ARP3	P47117	449 aa	Known RBP	3.96	□□□□□ -1.78
UBP7	YIL156W	YNL162W-A	Q3E7A8	72 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	PMD1	P32634	1753 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	PEX34	P25584	144 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	MIG3	P39943	394 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	RBL2	P48606	106 aa	Known RBP	3.96	□□□□□ -1.78
UBP7	YIL156W	YMD8	Q03697	442 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	RAV2	Q03956	351 aa		3.96	□□□□□ -1.78
UBP7	YIL156W	YBL059W	P34224	193 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	YBL081W	P38180	368 aa	Known RBP	3.95	□□□□□ -1.78
UBP7	YIL156W	IRC22	P40006	225 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	YGL118C	P53132	145 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	GAS3	Q03655	524 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	GRH1	Q04410	372 aa	Known RBP	3.95	□□□□□ -1.78
UBP7	YIL156W	MPD1	Q12404	318 aa	Known RBP	3.95	□□□□□ -1.78
UBP7	YIL156W	UBI4	P0CG63	381 aa	Known RBP	3.95	□□□□□ -1.78
UBP7	YIL156W	OM14	P38325	134 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	RIO2	P40160	425 aa	Known RBP	3.95	□□□□□ -1.78
UBP7	YIL156W	IGD1	P43598	195 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	MDM34	P53083	459 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	YGL101W	P53144	215 aa		3.95	□□□□□ -1.78
UBP7	YIL156W	LPP1	Q04396	274 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms