RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	YIF1	P53845	314 aa	Known RBP	2.7	□□□□□ -1.98
RRM3	YHR031C	EFM6	P53970	246 aa		2.7	□□□□□ -1.98
RRM3	YHR031C	HRI1	Q05905	244 aa	Known RBP	2.7	□□□□□ -1.98
RRM3	YHR031C	LIP2	Q06005	328 aa		2.7	□□□□□ -1.98
RRM3	YHR031C	CTR3	Q06686	241 aa		2.7	□□□□□ -1.98
RRM3	YHR031C	THP1	Q08231	455 aa		2.7	□□□□□ -1.98
RRM3	YHR031C	RPL7B	Q12213	244 aa	Known RBP	2.7	□□□□□ -1.98
RRM3	YHR031C	YKL183C-A	Q3E765	70 aa		2.7	□□□□□ -1.98
RRM3	YHR031C	YLR302C	O13544	120 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	FCY2	P17064	533 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	POP5	P28005	173 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	RAD23	P32628	398 aa	Known RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	ZRT1	P32804	376 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	SDH3	P33421	198 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	SOR1	P35497	357 aa	Known RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	MOH1	P38191	138 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	VID24	P38263	362 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	RPS20	P38701	121 aa	Known RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	ARO9	P38840	513 aa	Predicted RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	MSL1	P40567	111 aa	Predicted RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	CIN2	P46670	268 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	BIT61	P47041	543 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	AIM25	P47140	327 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	COQ5	P49017	307 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	VHT1	P53241	593 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	RHO5	P53879	331 aa	Known RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	IBD2	P53892	351 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	YKR011C	Q02209	353 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	YMR206W	Q03695	313 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	GRH1	Q04410	372 aa	Known RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	INM2	Q05533	292 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	MRPL51	Q06090	140 aa	Predicted RBP	2.69	□□□□□ -1.98
RRM3	YHR031C	SOR2	Q07786	357 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	DCI1	Q08558	271 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	PRM3	Q08931	133 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	SWM1	Q12379	170 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	MHF2	Q3E829	80 aa		2.69	□□□□□ -1.98
RRM3	YHR031C	YEL009C-A	A0A023PZF2	135 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	RAD6	P06104	172 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	HIP1	P06775	603 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	STE7	P06784	515 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	CDC21	P06785	304 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YKR104W	P0CE69	306 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YMR31	P19955	123 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	COX10	P21592	462 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YCR007C	P25354	239 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	URA10	P30402	227 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TKL2	P33315	681 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YKL187C	P34231	750 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YBR063C	P38083	404 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	ECM33	P38248	429 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	PEX7	P39108	375 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	SNO3	P43544	222 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	XPT1	P47165	209 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	CDH1	P53197	566 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	MTL1	P53214	551 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	SMM1	P53720	384 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	SNO2	P53823	222 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	APJ1	P53940	528 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	RNH201	P53942	307 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	RAV2	Q03956	351 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TSA2	Q04120	196 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YLR049C	Q12110	428 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YLR050C	Q12155	161 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	YJR112W-A	Q3E743	109 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	UBR1	P19812	1950 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	APC1	P53886	1748 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YDR157W	A0A023PZE8	133 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TIM9	O74700	87 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	COX1	P00401	534 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	SIR2	P06700	562 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	CPA1	P07258	411 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	RPS16A	P0CX51	143 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	RPS16B	P0CX52	143 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	PMI40	P29952	429 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	OAC1	P32332	324 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	MCR1	P36060	302 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	MIX23	P38162	196 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	ATG12	P38316	186 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TRS20	P38334	175 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TRR2	P38816	342 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	NSA2	P40078	261 aa	Known RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	IST3	P40565	148 aa	Predicted RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	YFL065C	P43539	102 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TTI2	P47168	421 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	ALG13	P53178	202 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YNR048W	P53740	393 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	PDR17	P53844	350 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YMR166C	Q03829	368 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	STP3	Q05937	343 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TAZ1	Q06510	381 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	YPR174C	Q06616	221 aa	Predicted RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	YPR203W	Q08994	102 aa		2.68	□□□□□ -1.98
RRM3	YHR031C	TIR4	Q12218	487 aa	Predicted RBP	2.68	□□□□□ -1.98
RRM3	YHR031C	ADH1	P00330	348 aa	Known RBP	2.67	□□□□□ -1.98
RRM3	YHR031C	RPL40A	P0CH08	128 aa	Known RBP	2.67	□□□□□ -1.98
RRM3	YHR031C	RPL40B	P0CH09	128 aa	Known RBP	2.67	□□□□□ -1.98
RRM3	YHR031C	GLN3	P18494	730 aa		2.67	□□□□□ -1.98
RRM3	YHR031C	GAS1	P22146	559 aa	Known RBP	2.67	□□□□□ -1.98
RRM3	YHR031C	MTR2	P34232	184 aa	Known RBP	2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms