RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W MRPL28P36527 147 aa3.5□□□□□ -1.85
DEG1YFL001W ECM14P38836 430 aa3.5□□□□□ -1.85
DEG1YFL001W FIS1P40515 155 aa3.5□□□□□ -1.85
DEG1YFL001W ERG10P41338 398 aaKnown RBP3.5□□□□□ -1.85
DEG1YFL001W ECO1P43605 281 aa3.5□□□□□ -1.85
DEG1YFL001W YJR141WP47172 347 aaPredicted RBP3.5□□□□□ -1.85
DEG1YFL001W YMR321CQ04898 105 aa3.5□□□□□ -1.85
DEG1YFL001W YPR063CQ12160 140 aa3.5□□□□□ -1.85
DEG1YFL001W SEC4P07560 215 aaKnown RBP3.49□□□□□ -1.85
DEG1YFL001W VPS51P36116 164 aa3.49□□□□□ -1.85
DEG1YFL001W RPA43P46669 326 aa3.49□□□□□ -1.85
DEG1YFL001W GTR2P53290 341 aa3.49□□□□□ -1.85
DEG1YFL001W ABF2Q02486 183 aa3.49□□□□□ -1.85
DEG1YFL001W YML096WQ04489 525 aa3.49□□□□□ -1.85
DEG1YFL001W GIM5Q04493 163 aa3.49□□□□□ -1.85
DEG1YFL001W YPL257WQ08974 193 aa3.49□□□□□ -1.85
DEG1YFL001W MYO1P08964 1928 aa3.49□□□□□ -1.85
DEG1YFL001W HIS3P06633 220 aa3.48□□□□□ -1.85
DEG1YFL001W RCN1P36054 211 aa3.48□□□□□ -1.85
DEG1YFL001W COS8P38723 381 aa3.48□□□□□ -1.85
DEG1YFL001W VMA22P38784 181 aa3.48□□□□□ -1.85
DEG1YFL001W RPF1P38805 295 aaKnown RBP3.48□□□□□ -1.85
DEG1YFL001W YIR035CP40579 254 aa3.48□□□□□ -1.85
DEG1YFL001W PFS2P42841 465 aaKnown RBP3.48□□□□□ -1.85
DEG1YFL001W PRM8P53174 237 aa3.48□□□□□ -1.85
DEG1YFL001W GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
DEG1YFL001W RSM10Q03201 203 aa3.48□□□□□ -1.85
DEG1YFL001W GRH1Q04410 372 aaKnown RBP3.48□□□□□ -1.85
DEG1YFL001W YNG1Q08465 219 aa3.48□□□□□ -1.85
DEG1YFL001W NIP7Q08962 181 aaKnown RBP3.48□□□□□ -1.85
DEG1YFL001W YOR020W-AQ3E824 90 aa3.48□□□□□ -1.85
DEG1YFL001W TCA17P32613 152 aa3.47□□□□□ -1.85
DEG1YFL001W CPR5P35176 225 aa3.47□□□□□ -1.85
DEG1YFL001W PHB1P40961 287 aa3.47□□□□□ -1.85
DEG1YFL001W YJR056CP47115 236 aa3.47□□□□□ -1.85
DEG1YFL001W PET191Q02772 108 aa3.47□□□□□ -1.85
DEG1YFL001W AGC1Q12482 902 aa3.47□□□□□ -1.85
DEG1YFL001W RAD10P06838 210 aa3.46□□□□□ -1.85
DEG1YFL001W DSF1P0CX08 502 aa3.46□□□□□ -1.85
DEG1YFL001W YNR073CP0CX09 502 aa3.46□□□□□ -1.85
DEG1YFL001W RPL35AP0CX84 120 aaKnown RBP3.46□□□□□ -1.85
DEG1YFL001W RPL35BP0CX85 120 aaKnown RBP3.46□□□□□ -1.85
DEG1YFL001W ECM33P38248 429 aaKnown RBP3.46□□□□□ -1.85
DEG1YFL001W COG3P40094 801 aa3.46□□□□□ -1.85
DEG1YFL001W YJL016WP47072 561 aa3.46□□□□□ -1.85
DEG1YFL001W SSU72P53538 206 aaPredicted RBP3.46□□□□□ -1.85
DEG1YFL001W GRE1Q08969 168 aa3.46□□□□□ -1.85
DEG1YFL001W BBP1Q12365 385 aa3.46□□□□□ -1.85
DEG1YFL001W SNF6P18888 332 aa3.45□□□□□ -1.86
DEG1YFL001W NUF2P33895 451 aa3.45□□□□□ -1.86
DEG1YFL001W SHG1P38337 142 aa3.45□□□□□ -1.86
DEG1YFL001W DOG2P38773 246 aa3.45□□□□□ -1.86
DEG1YFL001W DOG1P38774 246 aa3.45□□□□□ -1.86
DEG1YFL001W POG1P40473 351 aa3.45□□□□□ -1.86
DEG1YFL001W YIL059CP40520 121 aa3.45□□□□□ -1.86
DEG1YFL001W BUD13P46947 266 aaPredicted RBP3.45□□□□□ -1.86
DEG1YFL001W OST2P46964 130 aa3.45□□□□□ -1.86
DEG1YFL001W YMD8Q03697 442 aa3.45□□□□□ -1.86
DEG1YFL001W YET3Q07451 203 aa3.45□□□□□ -1.86
DEG1YFL001W IES4Q08561 116 aa3.45□□□□□ -1.86
DEG1YFL001W USB1Q12208 290 aaKnown RBP3.45□□□□□ -1.86
DEG1YFL001W YET1P35723 206 aa3.44□□□□□ -1.86
DEG1YFL001W YGP1P38616 354 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W GIM4P40005 111 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W IRC22P40006 225 aa3.44□□□□□ -1.86
DEG1YFL001W CIN5P40917 295 aa3.44□□□□□ -1.86
DEG1YFL001W SNX4P47057 423 aa3.44□□□□□ -1.86
DEG1YFL001W TMA22P47089 198 aaPredicted RBP3.44□□□□□ -1.86
DEG1YFL001W LSM7P53905 115 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W YOR268CQ08734 132 aa3.44□□□□□ -1.86
DEG1YFL001W TOM1Q03280 3268 aa3.44□□□□□ -1.86
DEG1YFL001W RPS23AP0CX29 145 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W RPS23BP0CX30 145 aa3.44□□□□□ -1.86
DEG1YFL001W FBA1P14540 359 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W FCY2P17064 533 aa3.44□□□□□ -1.86
DEG1YFL001W CAF4P36130 643 aa3.44□□□□□ -1.86
DEG1YFL001W YBR063CP38083 404 aa3.44□□□□□ -1.86
DEG1YFL001W AGE2P40529 298 aa3.44□□□□□ -1.86
DEG1YFL001W GON7P46984 123 aa3.44□□□□□ -1.86
DEG1YFL001W VMA10P48836 114 aaKnown RBP3.44□□□□□ -1.86
DEG1YFL001W TIM8P57744 87 aa3.44□□□□□ -1.86
DEG1YFL001W MDM32Q12171 622 aa3.44□□□□□ -1.86
DEG1YFL001W YDR524C-BQ3E6R4 66 aa3.44□□□□□ -1.86
DEG1YFL001W MRS1P07266 363 aa3.43□□□□□ -1.86
DEG1YFL001W PHO13P19881 312 aa3.43□□□□□ -1.86
DEG1YFL001W MEI4P29467 408 aa3.43□□□□□ -1.86
DEG1YFL001W YAR068WP39564 161 aa3.43□□□□□ -1.86
DEG1YFL001W YGR050CP53231 118 aa3.43□□□□□ -1.86
DEG1YFL001W YIP3P53633 176 aa3.43□□□□□ -1.86
DEG1YFL001W YNL010WP53981 241 aaKnown RBP3.43□□□□□ -1.86
DEG1YFL001W TAO3P40468 2376 aa3.42□□□□□ -1.86
DEG1YFL001W CDC7P06243 507 aa3.42□□□□□ -1.86
DEG1YFL001W ADH3P07246 375 aaKnown RBP3.42□□□□□ -1.86
DEG1YFL001W AGA2P32781 87 aa3.42□□□□□ -1.86
DEG1YFL001W ARC15P40518 154 aaRIP-Chip data3.42□□□□□ -1.86not detected
DEG1YFL001W LSM1P47017 172 aaKnown RBP3.42□□□□□ -1.86
DEG1YFL001W SNO1Q03144 224 aa3.42□□□□□ -1.86
DEG1YFL001W ARO80Q04052 950 aa3.42□□□□□ -1.86
DEG1YFL001W LPP1Q04396 274 aa3.42□□□□□ -1.86
DEG1YFL001W FKS1P38631 1876 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms