RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SDH7Q04401 133 aa1.07□□□□□ -2.24
MSN5YDR335W MCH1Q07376 486 aa1.07□□□□□ -2.24
MSN5YDR335W MIM1Q08176 113 aa1.07□□□□□ -2.24
MSN5YDR335W YPL245WQ12179 454 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W YDR018CQ12185 396 aa1.07□□□□□ -2.24
MSN5YDR335W YPS3Q12303 508 aa1.07□□□□□ -2.24
MSN5YDR335W HRT3Q12347 344 aa1.07□□□□□ -2.24
MSN5YDR335W RDI1Q12434 202 aa1.07□□□□□ -2.24
MSN5YDR335W LSO2Q3E772 92 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W SCL1P21243 252 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W LDS1P31379 325 aa1.07□□□□□ -2.24
MSN5YDR335W TIP20P33891 701 aa1.07□□□□□ -2.24
MSN5YDR335W PHB1P40961 287 aa1.07□□□□□ -2.24
MSN5YDR335W APS3P47064 194 aa1.07□□□□□ -2.24
MSN5YDR335W IDP3P53982 420 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W TRM44Q02648 567 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W AIM36Q03798 255 aa1.07□□□□□ -2.24
MSN5YDR335W DGA1Q08650 418 aa1.07□□□□□ -2.24
MSN5YDR335W SLM3Q12093 417 aa1.07□□□□□ -2.24
MSN5YDR335W YLR412C-AQ3E742 68 aa1.07□□□□□ -2.24
MSN5YDR335W SNF4P12904 322 aa1.06□□□□□ -2.24
MSN5YDR335W TFC1P32367 649 aa1.06□□□□□ -2.24
MSN5YDR335W PHA2P32452 334 aa1.06□□□□□ -2.24
MSN5YDR335W CSE2P33308 149 aa1.06□□□□□ -2.24
MSN5YDR335W LSM4P40070 187 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W PRM5P40476 318 aa1.06□□□□□ -2.24
MSN5YDR335W BUD13P46947 266 aaPredicted RBP1.06□□□□□ -2.24
MSN5YDR335W OST2P46964 130 aa1.06□□□□□ -2.24
MSN5YDR335W YGR219WP53307 113 aa1.06□□□□□ -2.24
MSN5YDR335W COS6P53344 381 aa1.06□□□□□ -2.24
MSN5YDR335W TMA20P89886 181 aaPredicted RBP1.06□□□□□ -2.24
MSN5YDR335W PKR1Q03880 122 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W EMI1Q04406 187 aa1.06□□□□□ -2.24
MSN5YDR335W OSW1Q08692 278 aa1.06□□□□□ -2.24
MSN5YDR335W YPL162CQ12042 273 aa1.06□□□□□ -2.24
MSN5YDR335W AYT1Q12226 474 aa1.06□□□□□ -2.24
MSN5YDR335W IZH2Q12442 317 aa1.06□□□□□ -2.24
MSN5YDR335W YFR032C-BQ8TGU2 87 aa1.06□□□□□ -2.24
MSN5YDR335W SEC4P07560 215 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W DDI2P0CH63 225 aa1.06□□□□□ -2.24
MSN5YDR335W DDI3P0CH64 225 aa1.06□□□□□ -2.24
MSN5YDR335W MSI1P13712 422 aa1.06□□□□□ -2.24
MSN5YDR335W STP22P25604 385 aa1.06□□□□□ -2.24
MSN5YDR335W MGT1P26188 188 aa1.06□□□□□ -2.24
MSN5YDR335W SUI1P32911 108 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W NVJ1P38881 321 aa1.06□□□□□ -2.24
MSN5YDR335W BAT1P38891 393 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W CHL4P38907 458 aa1.06□□□□□ -2.24
MSN5YDR335W PEX17P40155 199 aa1.06□□□□□ -2.24
MSN5YDR335W RFC2P40348 353 aa1.06□□□□□ -2.24
MSN5YDR335W FAR7P43592 221 aa1.06□□□□□ -2.24
MSN5YDR335W YFR054CP43622 192 aa1.06□□□□□ -2.24
MSN5YDR335W MCM22P47167 239 aa1.06□□□□□ -2.24
MSN5YDR335W YGL262WP53054 175 aa1.06□□□□□ -2.24
MSN5YDR335W ARO8P53090 500 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W RCF2P53721 224 aa1.06□□□□□ -2.24
MSN5YDR335W COS1P53822 381 aa1.06□□□□□ -2.24
MSN5YDR335W YNL184CP53876 108 aa1.06□□□□□ -2.24
MSN5YDR335W NUP49Q02199 472 aa1.06□□□□□ -2.24
MSN5YDR335W PET191Q02772 108 aa1.06□□□□□ -2.24
MSN5YDR335W ADD37Q03233 198 aa1.06□□□□□ -2.24
MSN5YDR335W FMN1Q03778 218 aa1.06□□□□□ -2.24
MSN5YDR335W TRM12Q04235 462 aa1.06□□□□□ -2.24
MSN5YDR335W YMR315WQ04869 349 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W YHC1Q05900 231 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W PST2Q12335 198 aaKnown RBP1.06□□□□□ -2.24
MSN5YDR335W YEL009C-AA0A023PZF2 135 aa1.05□□□□□ -2.24
MSN5YDR335W SFC1P33303 322 aa1.05□□□□□ -2.24
MSN5YDR335W IPI1P38803 334 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W EDC2P40023 145 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W VMA10P48836 114 aaKnown RBP1.05□□□□□ -2.24
MSN5YDR335W UFD1P53044 361 aa1.05□□□□□ -2.24
MSN5YDR335W TOS8P53147 276 aa1.05□□□□□ -2.24
MSN5YDR335W SWP1Q02795 286 aa1.05□□□□□ -2.24
MSN5YDR335W PRP11Q07350 266 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W FDH1Q08911 376 aa1.05□□□□□ -2.24
MSN5YDR335W YML100W-AQ8TGT0 57 aa1.05□□□□□ -2.24
MSN5YDR335W HTL1Q9URQ5 78 aa1.05□□□□□ -2.24
MSN5YDR335W BUD23P25627 275 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W AEP1P32493 518 aa1.05□□□□□ -2.24
MSN5YDR335W YKL102CP34249 101 aa1.05□□□□□ -2.24
MSN5YDR335W YBR063CP38083 404 aa1.05□□□□□ -2.24
MSN5YDR335W HMF1P40037 129 aaKnown RBP1.05□□□□□ -2.24
MSN5YDR335W UFE1P41834 346 aa1.05□□□□□ -2.24
MSN5YDR335W YGL101WP53144 215 aa1.05□□□□□ -2.24
MSN5YDR335W CLD1P53264 445 aa1.05□□□□□ -2.24
MSN5YDR335W DYN2Q02647 92 aa1.05□□□□□ -2.24
MSN5YDR335W SCW10Q04951 389 aa1.05□□□□□ -2.24
MSN5YDR335W YPR114WQ06107 315 aa1.05□□□□□ -2.24
MSN5YDR335W YOR376WQ08900 122 aa1.05□□□□□ -2.24
MSN5YDR335W DAS2Q12084 232 aa1.05□□□□□ -2.24
MSN5YDR335W PRM4Q12498 284 aa1.05□□□□□ -2.24
MSN5YDR335W RPS1BP23248 255 aaKnown RBP1.05□□□□□ -2.24
MSN5YDR335W VMA11P32842 164 aa1.05□□□□□ -2.24
MSN5YDR335W MRPL24P36525 258 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W RPS20P38701 121 aaKnown RBP1.05□□□□□ -2.24
MSN5YDR335W PRE5P40302 234 aaKnown RBP1.05□□□□□ -2.24
MSN5YDR335W AYR1P40471 297 aa1.05□□□□□ -2.24
MSN5YDR335W HPM1P40481 377 aa1.05□□□□□ -2.24
MSN5YDR335W IGD1P43598 195 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms