RNA–Protein interactions for RNA: YBR098W

MMS4, Transcript of Subunit of structure-specific Mms4p-Mus81p endonuclease, yeast

Gene MMS4, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS4	YBR098W	RFC4	P40339	323 aa	Known RBP	0.63	□□□□□ -2.31
MMS4	YBR098W	COG5	P53951	403 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	YLR162W	Q06235	118 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	SIR2	P06700	562 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	MRS1	P07266	363 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	MRPS28	P21771	286 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	MDH2	P22133	377 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	BET1	P22804	142 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	VMA22	P38784	181 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	SVP26	P38869	228 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	ERG10	P41338	398 aa	Known RBP	0.63	□□□□□ -2.31
MMS4	YBR098W	MPC3	P53311	146 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	MRPS17	Q03246	237 aa	Predicted RBP	0.63	□□□□□ -2.31
MMS4	YBR098W	GET4	Q12125	312 aa		0.63	□□□□□ -2.31
MMS4	YBR098W	RPL25	P04456	142 aa	Known RBP	0.62	□□□□□ -2.31
MMS4	YBR098W	RPL2A	P0CX45	254 aa	Known RBP	0.62	□□□□□ -2.31
MMS4	YBR098W	RPL2B	P0CX46	254 aa	Known RBP	0.62	□□□□□ -2.31
MMS4	YBR098W	YET1	P35723	206 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	SKG1	P36169	355 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	AVT2	P39981	480 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	YER135C	P40082	130 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	MMS2	P53152	137 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	YML108W	Q03759	105 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	ABP140	Q08641	628 aa	Known RBP	0.62	□□□□□ -2.31
MMS4	YBR098W	GRE1	Q08969	168 aa		0.62	□□□□□ -2.31
MMS4	YBR098W	FSF1	Q12029	327 aa	Known RBP	0.62	□□□□□ -2.31
MMS4	YBR098W	IKI3	Q06706	1349 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	RPL27A	P0C2H6	136 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	URA5	P13298	226 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	ADE1	P27616	306 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	OPY1	P38271	328 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	VTC1	P40046	129 aa	RIP-Chip data	0.61	□□□□□ -2.31	not detected
MMS4	YBR098W	BUD25	P85052	153 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	CWC21	Q03375	135 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	ARO80	Q04052	950 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	YLR236C	A0A023PZG4	107 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	YOL162W	P0CF19	215 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	YPK2	P18961	677 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	ASF2	P32448	525 aa	Predicted RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	TRM5	P38793	499 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	HMF1	P40037	129 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	ARP3	P47117	449 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	YJR111C	P47148	283 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	GET1	P53192	235 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	POP3	P53833	195 aa	Predicted RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	YMR226C	Q05016	267 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	GPM2	Q12008	311 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	MDM32	Q12171	622 aa		0.61	□□□□□ -2.31
MMS4	YBR098W	ACC1	Q00955	2233 aa	Known RBP	0.61	□□□□□ -2.31
MMS4	YBR098W	POR1	P04840	283 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	MAG1	P22134	296 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	CNB1	P25296	175 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	YCR090C	P25654	182 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	OCH1	P31755	480 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	SNC2	P33328	115 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	YBR285W	P38354	144 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	KNH1	P50112	268 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	UBC12	P52491	188 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	NUP49	Q02199	472 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	HNT1	Q04344	158 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	MBF1	O14467	151 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	QCR8	P08525	94 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	SPO13	P23624	291 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	UPS2	P35200	230 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	KDX1	P36005	433 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	YBR220C	P38318	560 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	YNL184C	P53876	108 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	YMR099C	Q03161	297 aa	Known RBP	0.6	□□□□□ -2.31
MMS4	YBR098W	YOL014W	Q08110	124 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	RAD28	Q12021	506 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	IGO2	Q9P305	131 aa		0.6	□□□□□ -2.31
MMS4	YBR098W	MET5	P47169	1442 aa		0.59	□□□□□ -2.31
MMS4	YBR098W	CKS1	P20486	150 aa	Known RBP	0.59	□□□□□ -2.32
MMS4	YBR098W	YGL010W	P25338	174 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	ERJ5	P43613	295 aa	Predicted RBP	0.59	□□□□□ -2.32
MMS4	YBR098W	ARO8	P53090	500 aa	Known RBP	0.59	□□□□□ -2.32
MMS4	YBR098W	CGR1	P53188	120 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	ANT1	Q06497	328 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	NAT3	Q06504	195 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	DGA1	Q08650	418 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	ATG40	Q99325	256 aa		0.59	□□□□□ -2.32
MMS4	YBR098W	SEC11	P15367	167 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	PAN3	P36102	679 aa	Predicted RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	YKR041W	P36134	250 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	FMP23	P38231	175 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	TVP23	P38962	199 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	YEA4	P40004	342 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	YPL073C	P40323	161 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	SER2	P42941	309 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	NOC4	Q06512	552 aa	Predicted RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	BRX1	Q08235	291 aa	Known RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	YML100W-A	Q8TGT0	57 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	FPR1	P20081	114 aa	Known RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	TMA19	P35691	167 aa	Known RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	RPL13B	P40212	199 aa	Known RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	SKI6	P46948	246 aa	Predicted RBP	0.58	□□□□□ -2.32
MMS4	YBR098W	SAY1	P53324	424 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	RNH202	Q05635	350 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	YOL024W	Q08172	172 aa		0.58	□□□□□ -2.32
MMS4	YBR098W	FYV12	Q08559	129 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms