RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W YMR030W-AQ3E760 96 aa1.51□□□□□ -2.17
VPS15YBR097W FAS2P19097 1887 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W ECM12O13529 151 aa1.5□□□□□ -2.17
VPS15YBR097W VPS63O13549 108 aa1.5□□□□□ -2.17
VPS15YBR097W ADH1P00330 348 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W HAP2P06774 265 aa1.5□□□□□ -2.17
VPS15YBR097W RPL31AP0C2H8 113 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W YEL076C-AP0CX16 216 aa1.5□□□□□ -2.17
VPS15YBR097W YLR464WP0CX17 216 aa1.5□□□□□ -2.17
VPS15YBR097W GCY1P14065 312 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
VPS15YBR097W ERS1P17261 260 aa1.5□□□□□ -2.17
VPS15YBR097W PUB1P32588 453 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
VPS15YBR097W TIM23P32897 222 aa1.5□□□□□ -2.17
VPS15YBR097W SMP1P38128 452 aa1.5□□□□□ -2.17
VPS15YBR097W ATG8P38182 117 aaRIP-Chip data1.5□□□□□ -2.17not detected
VPS15YBR097W RPS20P38701 121 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W SNF11P38956 169 aa1.5□□□□□ -2.17
VPS15YBR097W GGC1P38988 300 aa1.5□□□□□ -2.17
VPS15YBR097W YEL076CP39971 216 aa1.5□□□□□ -2.17
VPS15YBR097W RPL13BP40212 199 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W YIL054WP40524 105 aa1.5□□□□□ -2.17
VPS15YBR097W MSL1P40567 111 aaPredicted RBP1.5□□□□□ -2.17
VPS15YBR097W SHR5P41912 237 aa1.5□□□□□ -2.17
VPS15YBR097W RRT5P43607 289 aa1.5□□□□□ -2.17
VPS15YBR097W RSM10Q03201 203 aa1.5□□□□□ -2.17
VPS15YBR097W TPP1Q03796 238 aa1.5□□□□□ -2.17
VPS15YBR097W SEC13Q04491 297 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W HSP33Q08914 237 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W DGK1Q12382 290 aa1.5□□□□□ -2.17
VPS15YBR097W RPL13AQ12690 199 aaPredicted RBP1.5□□□□□ -2.17
VPS15YBR097W YIR021W-AQ3E739 70 aa1.5□□□□□ -2.17
VPS15YBR097W COA2Q3E823 68 aa1.5□□□□□ -2.17
VPS15YBR097W FKS3Q04952 1785 aa1.5□□□□□ -2.17
VPS15YBR097W FMP49A0A023PZB3 126 aa1.5□□□□□ -2.17
VPS15YBR097W GPM1P00950 247 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W ERG4P25340 473 aa1.5□□□□□ -2.17
VPS15YBR097W IMG2P25642 146 aaPredicted RBP1.5□□□□□ -2.17
VPS15YBR097W ERG2P32352 222 aa1.5□□□□□ -2.17
VPS15YBR097W FPR2P32472 135 aa1.5□□□□□ -2.17
VPS15YBR097W PPZ2P33329 710 aa1.5□□□□□ -2.17
VPS15YBR097W STS1P38637 319 aa1.5□□□□□ -2.17
VPS15YBR097W YHL042WP38729 150 aa1.5□□□□□ -2.17
VPS15YBR097W YIA6P40556 373 aa1.5□□□□□ -2.17
VPS15YBR097W POP1P41812 875 aa1.5□□□□□ -2.17
VPS15YBR097W MID1P41821 548 aa1.5□□□□□ -2.17
VPS15YBR097W AIM22P47051 409 aa1.5□□□□□ -2.17
VPS15YBR097W YGL230CP53074 147 aa1.5□□□□□ -2.17
VPS15YBR097W RNH201P53942 307 aa1.5□□□□□ -2.17
VPS15YBR097W ORM2Q06144 216 aa1.5□□□□□ -2.17
VPS15YBR097W TDA6Q06466 467 aa1.5□□□□□ -2.17
VPS15YBR097W YDL242WQ07746 117 aa1.5□□□□□ -2.17
VPS15YBR097W RAV1P47104 1357 aa1.5□□□□□ -2.17
VPS15YBR097W TY3B-IQ7LHG5 1498 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W ADH2P00331 348 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W RAD10P06838 210 aa1.5□□□□□ -2.17
VPS15YBR097W GDH1P07262 454 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W YOL163WP0CF20 169 aa1.5□□□□□ -2.17
VPS15YBR097W HMRA1P0CY11 126 aa1.5□□□□□ -2.17
VPS15YBR097W SEC62P21825 274 aa1.5□□□□□ -2.17
VPS15YBR097W AIM17P23180 465 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W AAT2P23542 418 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W AVT5P38176 459 aa1.5□□□□□ -2.17
VPS15YBR097W OM14P38325 134 aa1.5□□□□□ -2.17
VPS15YBR097W HRB1P38922 454 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
VPS15YBR097W PEX7P39108 375 aa1.5□□□□□ -2.17
VPS15YBR097W AGE2P40529 298 aa1.5□□□□□ -2.17
VPS15YBR097W OST2P46964 130 aa1.5□□□□□ -2.17
VPS15YBR097W MAL13P53338 473 aa1.5□□□□□ -2.17
VPS15YBR097W MSO1P53604 210 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W UPS1Q05776 175 aa1.5□□□□□ -2.17
VPS15YBR097W SYM1Q06563 197 aa1.5□□□□□ -2.17
VPS15YBR097W YLR042CQ07990 161 aa1.5□□□□□ -2.17
VPS15YBR097W HNT3Q08702 217 aa1.5□□□□□ -2.17
VPS15YBR097W TIM18Q08749 192 aa1.5□□□□□ -2.17
VPS15YBR097W PRM7Q12459 698 aa1.5□□□□□ -2.17
VPS15YBR097W ZPS1Q12512 249 aa1.5□□□□□ -2.17
VPS15YBR097W MSB2P32334 1306 aa1.5□□□□□ -2.17
VPS15YBR097W HTB1P02293 131 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W HTB2P02294 131 aa1.5□□□□□ -2.17
VPS15YBR097W RPS14AP06367 137 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W PHO2P07269 559 aa1.5□□□□□ -2.17
VPS15YBR097W CKS1P20486 150 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W NUP1P20676 1076 aa1.5□□□□□ -2.17
VPS15YBR097W BET1P22804 142 aa1.5□□□□□ -2.17
VPS15YBR097W MIR1P23641 311 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W CTS1P29029 562 aa1.5□□□□□ -2.17
VPS15YBR097W SEC65P29478 273 aa1.5□□□□□ -2.17
VPS15YBR097W ERG24P32462 438 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W SCM4P32564 187 aa1.5□□□□□ -2.17
VPS15YBR097W IMP3P32899 183 aaPredicted RBP1.5□□□□□ -2.17
VPS15YBR097W NTF2P33331 125 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W KTI12P34253 313 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W DCW1P36091 449 aa1.5□□□□□ -2.17
VPS15YBR097W SWD2P36104 329 aaPredicted RBP1.5□□□□□ -2.17
VPS15YBR097W RPS14BP39516 138 aaKnown RBP1.5□□□□□ -2.17
VPS15YBR097W MIT1P40002 666 aa1.5□□□□□ -2.17
VPS15YBR097W AYR1P40471 297 aa1.5□□□□□ -2.17
VPS15YBR097W ARC15P40518 154 aaRIP-Chip data1.5□□□□□ -2.17 RIP-Chip
VPS15YBR097W SNM1P40993 198 aa1.5□□□□□ -2.17
VPS15YBR097W SPC1P46965 94 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 259.6 ms