RNA–Protein interactions for RNA: YAL016W

TPD3, Transcript of Regulatory subunit A of the heterotrimeric PP2A complex, yeastyeast

Gene TPD3, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPD3YAL016W YPD1Q07688 167 aa2.83□□□□□ -1.96
TPD3YAL016W YOL160WQ08321 113 aa2.83□□□□□ -1.96
TPD3YAL016W PRR2Q12310 699 aa2.83□□□□□ -1.96
TPD3YAL016W DOP1Q03921 1698 aa2.82□□□□□ -1.96
TPD3YAL016W TRR1P29509 319 aaKnown RBP2.82□□□□□ -1.96
TPD3YAL016W ERG24P32462 438 aaKnown RBP2.82□□□□□ -1.96
TPD3YAL016W AST2P39945 430 aaKnown RBP2.82□□□□□ -1.96
TPD3YAL016W YNL140CP53910 189 aa2.82□□□□□ -1.96
TPD3YAL016W COA4Q05809 96 aa2.82□□□□□ -1.96
TPD3YAL016W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
TPD3YAL016W ISD11Q6Q560 94 aa2.82□□□□□ -1.96
TPD3YAL016W SNT2P53127 1403 aa2.82□□□□□ -1.96
TPD3YAL016W YLR462WO13556 202 aa2.81□□□□□ -1.96
TPD3YAL016W TOM40P23644 387 aaKnown RBP2.81□□□□□ -1.96
TPD3YAL016W RNP1P32385 249 aa2.81□□□□□ -1.96
TPD3YAL016W PTM1P32857 523 aa2.81□□□□□ -1.96
TPD3YAL016W YEL075CP39972 122 aa2.81□□□□□ -1.96
TPD3YAL016W NIP7Q08962 181 aaKnown RBP2.81□□□□□ -1.96
TPD3YAL016W GEP5Q12393 293 aa2.81□□□□□ -1.96
TPD3YAL016W DDP1Q99321 188 aaKnown RBP2.81□□□□□ -1.96
TPD3YAL016W IGO2Q9P305 131 aa2.81□□□□□ -1.96
TPD3YAL016W HTL1Q9URQ5 78 aa2.81□□□□□ -1.96
TPD3YAL016W CCH1P50077 2039 aa2.81□□□□□ -1.96
TPD3YAL016W TAH1P25638 111 aaPredicted RBP2.81□□□□□ -1.96
TPD3YAL016W TCA17P32613 152 aa2.81□□□□□ -1.96
TPD3YAL016W SEO1P39709 593 aa2.81□□□□□ -1.96
TPD3YAL016W CIN5P40917 295 aa2.81□□□□□ -1.96
TPD3YAL016W YFL012WP43580 148 aa2.81□□□□□ -1.96
TPD3YAL016W PRM8P53174 237 aa2.81□□□□□ -1.96
TPD3YAL016W ALG9P53868 555 aaKnown RBP2.81□□□□□ -1.96
TPD3YAL016W LSM7P53905 115 aaKnown RBP2.81□□□□□ -1.96
TPD3YAL016W TY1B-BRQ12193 1756 aa2.81□□□□□ -1.96
TPD3YAL016W TY1B-GR3Q12316 1755 aa2.81□□□□□ -1.96
TPD3YAL016W TY1B-ORQ92393 1755 aa2.81□□□□□ -1.96
TPD3YAL016W PDR11P40550 1411 aa2.8□□□□□ -1.96
TPD3YAL016W CUP2P15315 225 aa2.8□□□□□ -1.96
TPD3YAL016W YKR041WP36134 250 aa2.8□□□□□ -1.96
TPD3YAL016W ECM31P38122 312 aa2.8□□□□□ -1.96
TPD3YAL016W DOG2P38773 246 aa2.8□□□□□ -1.96
TPD3YAL016W DOG1P38774 246 aa2.8□□□□□ -1.96
TPD3YAL016W RPA43P46669 326 aa2.8□□□□□ -1.96
TPD3YAL016W LSM1P47017 172 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W LSM8P47093 109 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W RSM27P53305 110 aa2.8□□□□□ -1.96
TPD3YAL016W SSU72P53538 206 aaPredicted RBP2.8□□□□□ -1.96
TPD3YAL016W GRH1Q04410 372 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W AKR2Q12013 749 aa2.8□□□□□ -1.96
TPD3YAL016W MDM32Q12171 622 aa2.8□□□□□ -1.96
TPD3YAL016W RPO41P13433 1351 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W RPA190P10964 1664 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W RPL25P04456 142 aaKnown RBP2.8□□□□□ -1.96
TPD3YAL016W AME1P38313 324 aa2.8□□□□□ -1.96
TPD3YAL016W HPM1P40481 377 aa2.8□□□□□ -1.96
TPD3YAL016W YOL024WQ08172 172 aa2.8□□□□□ -1.96
TPD3YAL016W YPL257WQ08974 193 aa2.8□□□□□ -1.96
TPD3YAL016W LTE1P07866 1435 aa2.79□□□□□ -1.96
TPD3YAL016W YGL041W-AP0C5N3 154 aa2.79□□□□□ -1.96
TPD3YAL016W TRX3P25372 127 aa2.79□□□□□ -1.96
TPD3YAL016W CLG1P35190 452 aa2.79□□□□□ -1.96
TPD3YAL016W TMA20P89886 181 aaPredicted RBP2.79□□□□□ -1.96
TPD3YAL016W GPI17Q04080 534 aa2.79□□□□□ -1.96
TPD3YAL016W NKP2Q06162 153 aa2.79□□□□□ -1.96
TPD3YAL016W TDA8Q6B2U8 126 aa2.79□□□□□ -1.96
TPD3YAL016W USO1P25386 1790 aa2.79□□□□□ -1.96
TPD3YAL016W QCR2P07257 368 aa2.78□□□□□ -1.96
TPD3YAL016W FCY2P17064 533 aa2.78□□□□□ -1.96
TPD3YAL016W LDB16P25587 256 aa2.78□□□□□ -1.96
TPD3YAL016W RPF1P38805 295 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W AIM2P39721 246 aa2.78□□□□□ -1.96
TPD3YAL016W GIM4P40005 111 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W IRC22P40006 225 aa2.78□□□□□ -1.96
TPD3YAL016W YER076CP40049 302 aa2.78□□□□□ -1.96
TPD3YAL016W PDS1P40316 373 aaPredicted RBP2.78□□□□□ -1.96
TPD3YAL016W PFS2P42841 465 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W YFR045WP43617 309 aa2.78□□□□□ -1.96
TPD3YAL016W YGR050CP53231 118 aa2.78□□□□□ -1.96
TPD3YAL016W GAS3Q03655 524 aa2.78□□□□□ -1.96
TPD3YAL016W YMD8Q03697 442 aa2.78□□□□□ -1.96
TPD3YAL016W FCF1Q05498 189 aaPredicted RBP2.78□□□□□ -1.96
TPD3YAL016W YLR036CQ07986 203 aa2.78□□□□□ -1.96
TPD3YAL016W DUR1,2P32528 1835 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W TY1B-JR2P47100 1755 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W TY1B-ER2Q03619 1755 aa2.78□□□□□ -1.96
TPD3YAL016W TY1B-MR1Q04214 1755 aa2.78□□□□□ -1.96
TPD3YAL016W TY1B-MR2Q04670 1755 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W TY1B-LR1Q12088 1755 aaKnown RBP2.78□□□□□ -1.96
TPD3YAL016W TY1B-NL1Q12112 1755 aa2.78□□□□□ -1.96
TPD3YAL016W TY1B-GR1Q12141 1755 aa2.78□□□□□ -1.96
TPD3YAL016W TY1B-BLQ12490 1755 aa2.78□□□□□ -1.96
TPD3YAL016W YBT1P32386 1661 aa2.78□□□□□ -1.96
TPD3YAL016W RSF2P46974 1380 aa2.78□□□□□ -1.97
TPD3YAL016W CDC8P00572 216 aa2.78□□□□□ -1.97
TPD3YAL016W CDC7P06243 507 aa2.78□□□□□ -1.97
TPD3YAL016W RAD10P06838 210 aa2.78□□□□□ -1.97
TPD3YAL016W SGA1P08019 549 aa2.78□□□□□ -1.97
TPD3YAL016W YPR170W-BP0C5R9 85 aa2.78□□□□□ -1.97
TPD3YAL016W RMD6P39975 231 aa2.78□□□□□ -1.97
TPD3YAL016W FMP32P43557 207 aa2.78□□□□□ -1.97
TPD3YAL016W JAC1P53193 184 aa2.78□□□□□ -1.97
TPD3YAL016W COS6P53344 381 aa2.78□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms