RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 SDC1Q03323 175 aa7.49□□□□□ -1.21
LSR1LSR1 YDR415CQ04033 374 aaPredicted RBP7.49□□□□□ -1.21
LSR1LSR1 YDR387CQ04162 555 aa7.49□□□□□ -1.21
LSR1LSR1 IZH2Q12442 317 aa7.49□□□□□ -1.21
LSR1LSR1 HUG1Q6Q5K6 68 aa7.49□□□□□ -1.21
LSR1LSR1 RPS16AP0CX51 143 aaKnown RBP7.48□□□□□ -1.21
LSR1LSR1 RPS16BP0CX52 143 aaKnown RBP7.48□□□□□ -1.21
LSR1LSR1 LSB5P25369 354 aa7.48□□□□□ -1.21
LSR1LSR1 MRPL28P36527 147 aa7.48□□□□□ -1.21
LSR1LSR1 YBR096WP38256 230 aa7.48□□□□□ -1.21
LSR1LSR1 PEX7P39108 375 aa7.48□□□□□ -1.21
LSR1LSR1 TAX4P47030 604 aa7.48□□□□□ -1.21
LSR1LSR1 PRY1P47032 299 aa7.48□□□□□ -1.21
LSR1LSR1 YMR090WQ04304 227 aaKnown RBP7.48□□□□□ -1.21
LSR1LSR1 YLR179CQ06252 201 aaKnown RBP7.48□□□□□ -1.21
LSR1LSR1 YOR186WQ08560 144 aa7.48□□□□□ -1.21
LSR1LSR1 FCY22Q12119 530 aa7.48□□□□□ -1.21
LSR1LSR1 USB1Q12208 290 aaKnown RBP7.48□□□□□ -1.21
LSR1LSR1 FRE8Q12209 686 aa7.48□□□□□ -1.21
LSR1LSR1 PRR2Q12310 699 aa7.48□□□□□ -1.21
LSR1LSR1 YDR157WA0A023PZE8 133 aa7.47□□□□□ -1.21
LSR1LSR1 IRC22P40006 225 aa7.47□□□□□ -1.21
LSR1LSR1 CCS1P40202 249 aaKnown RBP7.47□□□□□ -1.21
LSR1LSR1 TNA1P53322 534 aa7.47□□□□□ -1.21
LSR1LSR1 SMM1P53720 384 aaKnown RBP7.47□□□□□ -1.21
LSR1LSR1 MRP51Q02950 344 aa7.47□□□□□ -1.21
LSR1LSR1 HED1Q03937 162 aa7.47□□□□□ -1.21
LSR1LSR1 TSA2Q04120 196 aa7.47□□□□□ -1.21
LSR1LSR1 MIX14Q04341 121 aa7.47□□□□□ -1.21
LSR1LSR1 FSH2Q05015 223 aa7.47□□□□□ -1.21
LSR1LSR1 YDL242WQ07746 117 aa7.47□□□□□ -1.21
LSR1LSR1 RFU1Q08003 200 aa7.47□□□□□ -1.21
LSR1LSR1 THI72Q08579 599 aa7.47□□□□□ -1.21
LSR1LSR1 SAG1P20840 650 aa7.46□□□□□ -1.22
LSR1LSR1 ERG8P24521 451 aa7.46□□□□□ -1.22
LSR1LSR1 YCR101CP25607 182 aa7.46□□□□□ -1.22
LSR1LSR1 SWD3P38123 315 aa7.46□□□□□ -1.22
LSR1LSR1 MGE1P38523 228 aa7.46□□□□□ -1.22
LSR1LSR1 PAC2P39937 518 aa7.46□□□□□ -1.22
LSR1LSR1 GET2P40056 285 aa7.46□□□□□ -1.22
LSR1LSR1 PAU4P53427 120 aa7.46□□□□□ -1.22
LSR1LSR1 CYT2Q00873 224 aa7.46□□□□□ -1.22
LSR1LSR1 AKR2Q12013 749 aa7.46□□□□□ -1.22
LSR1LSR1 NCE102Q12207 173 aaRIP-Chip data7.46□□□□□ -1.22not detected
LSR1LSR1 MPD1Q12404 318 aaKnown RBP7.46□□□□□ -1.22
LSR1LSR1 YOR032W-AQ8TGS1 66 aa7.46□□□□□ -1.22
LSR1LSR1 CBP6P07253 162 aaPredicted RBP7.45□□□□□ -1.22
LSR1LSR1 PAU1P0CE88 120 aa7.45□□□□□ -1.22
LSR1LSR1 PAU14P0CE89 120 aa7.45□□□□□ -1.22
LSR1LSR1 PAU6P0CE90 120 aa7.45□□□□□ -1.22
LSR1LSR1 PAU18P0CE91 120 aa7.45□□□□□ -1.22
LSR1LSR1 PAU8P0CE92 120 aa7.45□□□□□ -1.22
LSR1LSR1 PAU11P0CE93 120 aa7.45□□□□□ -1.22
LSR1LSR1 NHP6AP11632 93 aaKnown RBP7.45□□□□□ -1.22
LSR1LSR1 AHT1P29589 182 aa7.45□□□□□ -1.22
LSR1LSR1 DEG1P31115 442 aaKnown RBP7.45□□□□□ -1.22
LSR1LSR1 ALK2P32789 676 aaPredicted RBP7.45□□□□□ -1.22
LSR1LSR1 PAU13P38725 120 aa7.45□□□□□ -1.22
LSR1LSR1 PRM5P40476 318 aa7.45□□□□□ -1.22
LSR1LSR1 PAU5P43575 122 aa7.45□□□□□ -1.22
LSR1LSR1 HNT2P49775 206 aa7.45□□□□□ -1.22
LSR1LSR1 PAU10Q03050 120 aa7.45□□□□□ -1.22
LSR1LSR1 YOL118CQ08259 102 aa7.45□□□□□ -1.22
LSR1LSR1 PAU20Q08322 120 aa7.45□□□□□ -1.22
LSR1LSR1 YPL264CQ08980 353 aa7.45□□□□□ -1.22
LSR1LSR1 FYV7Q12247 151 aa7.45□□□□□ -1.22
LSR1LSR1 TMA17Q12513 150 aa7.45□□□□□ -1.22
LSR1LSR1 PAU9Q3E770 120 aa7.45□□□□□ -1.22
LSR1LSR1 YBR255C-AQ3E776 120 aa7.45□□□□□ -1.22
LSR1LSR1 SPS4P09937 338 aa7.44□□□□□ -1.22
LSR1LSR1 ELO2P25358 347 aa7.44□□□□□ -1.22
LSR1LSR1 ERV1P27882 189 aa7.44□□□□□ -1.22
LSR1LSR1 YKL075CP36083 450 aa7.44□□□□□ -1.22
LSR1LSR1 PBP1P53297 722 aaKnown RBP7.44□□□□□ -1.22
LSR1LSR1 ALG12P53730 551 aa7.44□□□□□ -1.22
LSR1LSR1 COQ11Q05892 277 aa7.44□□□□□ -1.22
LSR1LSR1 SME1Q12330 94 aaPredicted RBP7.44□□□□□ -1.22
LSR1LSR1 YOP1Q12402 180 aa7.44□□□□□ -1.22
LSR1LSR1 YOR192C-CQ3E736 78 aa7.44□□□□□ -1.22
LSR1LSR1 RPL25P04456 142 aaKnown RBP7.43□□□□□ -1.22
LSR1LSR1 FUN14P18411 198 aa7.43□□□□□ -1.22
LSR1LSR1 YUH1P35127 236 aa7.43□□□□□ -1.22
LSR1LSR1 UPS2P35200 230 aa7.43□□□□□ -1.22
LSR1LSR1 RPL14AP36105 138 aaKnown RBP7.43□□□□□ -1.22
LSR1LSR1 RPL14BP38754 138 aaKnown RBP7.43□□□□□ -1.22
LSR1LSR1 NOP16P40007 231 aaKnown RBP7.43□□□□□ -1.22
LSR1LSR1 YIL169CP40442 995 aa7.43□□□□□ -1.22
LSR1LSR1 OST1P41543 476 aaKnown RBP7.43□□□□□ -1.22
LSR1LSR1 ECO1P43605 281 aa7.43□□□□□ -1.22
LSR1LSR1 HCH1P53834 153 aa7.43□□□□□ -1.22
LSR1LSR1 APS2Q00381 147 aa7.43□□□□□ -1.22
LSR1LSR1 DFG5Q05031 458 aa7.43□□□□□ -1.22
LSR1LSR1 ATG5Q12380 294 aa7.43□□□□□ -1.22
LSR1LSR1 FMP27Q06179 2628 aa7.43□□□□□ -1.22
LSR1LSR1 PTC7P38797 343 aa7.42□□□□□ -1.22
LSR1LSR1 YER079WP40052 210 aaKnown RBP7.42□□□□□ -1.22
LSR1LSR1 YAP1802P53309 568 aa7.42□□□□□ -1.22
LSR1LSR1 YDR391CQ04170 232 aa7.42□□□□□ -1.22
LSR1LSR1 PAM18Q07914 168 aa7.42□□□□□ -1.22
LSR1LSR1 YOR292CQ08743 309 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms