RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 HASPINQ8TF76 798 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 KAT5Q92993 513 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 RNPC3Q96LT9 517 aaKnown RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 SLC9A7Q96T83 725 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 ARID3AQ99856 593 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 TTYH3Q9C0H2 523 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 AJAP1Q9UKB5 411 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 PRG3Q9Y2Y8 225 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 KPNA7A9QM74 516 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 H0YGN5 161 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 RFX1P22670 979 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 TBXAS1P24557 533 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-230ENST00000641927 LILRA4P59901 499 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 CUL2Q13617 745 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 HERC6Q8IVU3 1022 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 ZNF689Q96CS4 500 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-230ENST00000641927 PDLIM2Q96JY6 352 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
PHGDH-230ENST00000641927 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
PHGDH-230ENST00000641927 FNDC1Q4ZHG4 1894 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-230ENST00000641927 A0A1W2PQJ5 194 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 AKR1B15C9JRZ8 316 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 RNF225M0QZC1 329 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 SPTLC1O15269 473 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 STAU1O95793 577 aaKnown RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 ALDH2P05091 517 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 IGFBP6P24592 240 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 KRT9P35527 623 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 ADKP55263 362 aaKnown RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 GCNT1Q02742 428 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 DCLRE1AQ6PJP8 1040 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 CMTR2Q8IYT2 770 aaKnown RBP18.74■□□□□ 0.59
PHGDH-230ENST00000641927 C3orf58Q8NDZ4 430 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 PHOSPHO2Q8TCD6 241 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 FAM81BQ96LP2 452 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 VRTNQ9H8Y1 702 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 FBXL5Q9UKA1 691 aa18.74■□□□□ 0.59
PHGDH-230ENST00000641927 SCN1AP35498 2009 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 KIF4AO95239 1232 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 PBX3P40426 434 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 USP8P40818 1118 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 ASPAP45381 313 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 DRAP1Q14919 205 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-230ENST00000641927 SHHQ15465 462 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 ENOSF1Q7L5Y1 443 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 CCDC186Q7Z3E2 898 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 GPIHBP1Q8IV16 184 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 KREMEN1Q96MU8 473 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 NAA15Q9BXJ9 866 aaKnown RBP18.73■□□□□ 0.59
PHGDH-230ENST00000641927 STK33Q9BYT3 514 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 EDEM3Q9BZQ6 932 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 FAN1Q9Y2M0 1017 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 DAAM1Q9Y4D1 1078 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 INSL6Q9Y581 213 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 PTPRSQ13332 1948 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 LRRC53A6NM62 1247 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 F8W810 466 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 NRP1O14786 923 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 TLL1O43897 1013 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 MFAP3LO75121 409 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 WEE2P0C1S8 567 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 CD58P19256 250 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 RAP1GAPP47736 663 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 SLC11A1P49279 550 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 ALDH7A1P49419 539 aaKnown RBP18.73■□□□□ 0.59
PHGDH-230ENST00000641927 ZBED6P86452 979 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 BAP1Q92560 729 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 TMEM175Q9BSA9 504 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 SMYD3Q9H7B4 428 aa18.73■□□□□ 0.59
PHGDH-230ENST00000641927 RC3H2Q9HBD1 1191 aaKnown RBP18.73■□□□□ 0.59
PHGDH-230ENST00000641927 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 I3L4J1 428 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 HUS1O60921 280 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 TADA2AO75478 443 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 ITGB1P05556 798 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 PNMA6AP0CW24 399 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-230ENST00000641927 KRT5P13647 590 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 BCAR1P56945 870 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 TSR1Q2NL82 804 aaKnown RBP18.72■□□□□ 0.59
PHGDH-230ENST00000641927 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 RAD9AQ99638 391 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 COLEC11Q9BWP8 271 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 CWH43Q9H720 699 aa18.72■□□□□ 0.59
PHGDH-230ENST00000641927 MRPL42Q9Y6G3 142 aaKnown RBP18.72■□□□□ 0.59
PHGDH-230ENST00000641927 LAMA2P24043 3122 aaKnown RBP18.71■□□□□ 0.59
PHGDH-230ENST00000641927 F8VZ95 297 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 CYB561D2O14569 222 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 GALTP07902 379 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 STAT1P42224 750 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 BRCC3P46736 316 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 CDH8P55286 799 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 GSDMDP57764 484 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 HTRA4P83105 476 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-230ENST00000641927 ARID5AQ03989 594 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 RASIP1Q5U651 963 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 PDXDC1Q6P996 788 aa18.71■□□□□ 0.59
PHGDH-230ENST00000641927 APPL2Q8NEU8 664 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms