RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TUBB4AP04350 444 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 USP8P40818 1118 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 ARHGAP25P42331 645 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 MAGEA1P43355 309 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 CDK7P50613 346 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 VAV2P52735 878 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 YARSP54577 528 aaKnown RBP14.07□□□□□ -0.16
PHGDH-221ENST00000641573 MYL6P60660 151 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 NOP14P78316 857 aaKnown RBP14.07□□□□□ -0.16
PHGDH-221ENST00000641573 TMEM132DQ14C87 1099 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 SLC18A3Q16572 532 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 TRIM71Q2Q1W2 868 aaKnown RBP14.07□□□□□ -0.16
PHGDH-221ENST00000641573 ARHGAP29Q52LW3 1261 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-221ENST00000641573 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 FAM71AQ8IYT1 594 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 SEZ6LQ9BYH1 1024 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 IMPG2Q9BZV3 1241 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 TRPV6Q9H1D0 765 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 ST3GAL5Q9UNP4 418 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
PHGDH-221ENST00000641573 NUB1Q9Y5A7 615 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 A0A087X0T9 212 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 ARVCFO00192 962 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
PHGDH-221ENST00000641573 FAM228BP0C875 321 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 CUL2Q13617 745 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 SGSM1Q2NKQ1 1148 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 FAM26DQ5JW98 314 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 FBXO47Q5MNV8 452 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 ZNF662Q6ZS27 426 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 ALYREFQ86V81 257 aaKnown RBP14.06□□□□□ -0.16
PHGDH-221ENST00000641573 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 KIF12Q96FN5 646 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 SNX27Q96L92 541 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 APOL6Q9BWW8 343 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 IFIH1Q9BYX4 1025 aaKnown RBP14.06□□□□□ -0.16
PHGDH-221ENST00000641573 NXF3Q9H4D5 531 aaKnown RBP14.06□□□□□ -0.16
PHGDH-221ENST00000641573 ADAMTS1Q9UHI8 967 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 COG5Q9UP83 839 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 DERAQ9Y315 318 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 C2CD2Q9Y426 696 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 HES2Q9Y543 173 aa14.06□□□□□ -0.16
PHGDH-221ENST00000641573 RCCD1A6NED2 376 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 DDX3XO00571 662 aaKnown RBP eCLIP14.05□□□□□ -0.167e-18■■■□□ 16.8
PHGDH-221ENST00000641573 GPR182O15218 404 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 CYP26A1O43174 497 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 GPR37L1O60883 481 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 CAND2O75155 1236 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 RECQL4O94761 1208 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ABL1P00519 1130 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 KRT19P08727 400 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 KRT5P13647 590 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 TNFAIP3P21580 790 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 TBXAS1P24557 533 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 CYP2C18P33260 490 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ETF1P62495 437 aaKnown RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 NFX1Q12986 1120 aaKnown RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 BMS1Q14692 1282 aaKnown RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 OTOP2Q7RTS6 562 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 TXLNBQ8N3L3 684 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 C1orf127Q8N9H9 656 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ZNF592Q92610 1267 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 TAF4BQ92750 862 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ARID3AQ99856 593 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 SYT11Q9BT88 431 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 ERVK-5Q9HDB9 667 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 LUC7LQ9NQ29 371 aaKnown RBP14.05□□□□□ -0.16
PHGDH-221ENST00000641573 CHST12Q9NRB3 414 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 PARP2Q9UGN5 583 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 SIX4Q9UIU6 781 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 IPPQ9Y573 584 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
PHGDH-221ENST00000641573 MUC6Q6W4X9 2439 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ANK1P16157 1881 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 KIF5CO60282 957 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ITGB3P05106 788 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 GHRP10912 638 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ACO1P21399 889 aaKnown RBP14.04□□□□□ -0.16
PHGDH-221ENST00000641573 AKAP5P24588 427 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 CD52P31358 61 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 GUCY2FP51841 1108 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 GNG11P61952 73 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 KIF5AQ12840 1032 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 LPIN1Q14693 890 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 CCDC122Q5T0U0 273 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 C10orf76Q5T2E6 689 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 SYT10Q6XYQ8 523 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 FAM126BQ8IXS8 530 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 TMEM130Q8N3G9 435 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 234.6 ms