RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SRGAP1Q7Z6B7 1085 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 TMEM175Q9BSA9 504 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 SPTBN4Q9H254 2564 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
ERGIC3-220ENST00000640748 F8W810 466 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 H0YCG3 227 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 CLIC2O15247 247 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 PI15O43692 258 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 KLRC2P26717 231 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 ABCD1P33897 745 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 RFC5P40937 340 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 CLCN5P51795 746 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 GTF2BQ00403 316 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 DSC1Q08554 894 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 KCNA1Q09470 495 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 DMP1Q13316 513 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 EMC2Q15006 297 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 FIGNQ5HY92 759 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 CCDC149Q6ZUS6 474 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 TMEM139Q8IV31 216 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 EMILIN2Q9BXX0 1053 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 XPNPEP1Q9NQW7 623 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 FAM186AA6NE01 2351 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
ERGIC3-220ENST00000640748 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 SLC16A4O15374 487 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 TEX28O15482 410 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 TSPAN1O60635 241 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 SOD2P04179 222 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 ALDH2P05091 517 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 KRT9P35527 623 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 TDGQ13569 410 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 C15orf39Q6ZRI6 1047 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 OTOP3Q7RTS5 596 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 SLC9A9Q8IVB4 645 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 C12orf56Q8IXR9 622 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 KCNK12Q9HB15 430 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 MIOSQ9NXC5 875 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 STK39Q9UEW8 545 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 LUC7L2Q9Y383 392 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 HES2Q9Y543 173 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 IPPQ9Y573 584 aa12.86□□□□□ -0.35
ERGIC3-220ENST00000640748 DCHS1Q96JQ0 3298 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 A0A1W2PQJ5 194 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 ARL5CA6NH57 179 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 C2CD2LO14523 706 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 AKAP3O75969 853 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 PAPLNO95428 1278 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 AOC1P19801 751 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 SCP2P22307 547 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 FECHP22830 423 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 MLH1P40692 756 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 NPTX2P47972 431 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 PTENP60484 403 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 AMHR2Q16671 573 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 DNTTIP2Q5QJE6 756 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
ERGIC3-220ENST00000640748 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms