RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 RABEP2Q9H5N1 569 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 TRPM5Q9NZQ8 1165 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 DNAJC6O75061 913 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 CASP2P42575 452 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 NNTQ13423 1086 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 ART3Q13508 389 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 SLC12A1Q13621 1099 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 TBCCQ15814 346 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 GRIK4Q16099 956 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 FSCBQ5H9T9 825 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 CCDC124Q96CT7 223 aaKnown RBP11.59□□□□□ -0.55
SCN1B-208ENST00000640135 TSPAN17Q96FV3 270 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 ERGIC2Q96RQ1 377 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 EGFL8Q99944 293 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 NFU1Q9UMS0 254 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 NOVA2Q9UNW9 492 aaKnown RBP11.59□□□□□ -0.55
SCN1B-208ENST00000640135 IPPQ9Y573 584 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 PI4K2BG5E9Z4 385 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 PAX3P23760 479 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 SLCO1A2P46721 670 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 GALCP54803 685 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 ADCY1Q08828 1119 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 GRB10Q13322 594 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 PCBP1Q15365 356 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCN1B-208ENST00000640135 KIZQ2M2Z5 673 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 ACAD11Q709F0 780 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 WDR49Q8IV35 697 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 RNPC3Q96LT9 517 aaKnown RBP11.59□□□□□ -0.55
SCN1B-208ENST00000640135 ENTPD7Q9NQZ7 604 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
SCN1B-208ENST00000640135 AMHP03971 560 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 INSRRP14616 1297 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 EPHB3P54753 998 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 IMPG1Q17R60 797 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 HPS3Q969F9 1004 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 MAF1Q9H063 256 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 MRPL40Q9NQ50 206 aaKnown RBP11.58□□□□□ -0.55
SCN1B-208ENST00000640135 OLA1Q9NTK5 396 aaKnown RBP11.58□□□□□ -0.55
SCN1B-208ENST00000640135 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 NDFIP2Q9NV92 336 aa11.58□□□□□ -0.55
SCN1B-208ENST00000640135 ABI2Q9NYB9 513 aaPredicted RBP11.58□□□□□ -0.55
SCN1B-208ENST00000640135 SMIM24O75264 130 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ZMYND10O75800 440 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ESRRBO95718 433 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 HIST1H2AGP0C0S8 130 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 HIST1H2ADP20671 130 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TMPRSS15P98073 1019 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 VGLL4Q14135 290 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 RABGAP1LQ5R372 815 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 KLHDC7AQ5VTJ3 777 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 HIST1H2AHQ96KK5 128 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 HIST1H2AJQ99878 128 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 H2AFJQ9BTM1 129 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 VPS11Q9H270 941 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 OLFML3Q9NRN5 406 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TXLNGQ9NUQ3 528 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ABCF3Q9NUQ8 709 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 GNGT2O14610 69 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 SPAG6O75602 509 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TRPA1O75762 1119 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 SP3Q02447 781 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 MFSD10Q14728 455 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 DCAF6Q58WW2 860 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 NFRKBQ6P4R8 1299 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 PPM1NQ8N819 430 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ARHGEF26Q96DR7 871 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 FRMD8P1Q9BZ68 369 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ASB7Q9H672 318 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 PAK5Q9P286 719 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 BAIAP2L1Q9UHR4 511 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TRIM33Q9UPN9 1127 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 RASA4BC9J798 803 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 RASA4O43374 803 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 MED24O75448 989 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 FSCN1Q16658 493 aaKnown RBP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 CTXN3Q4LDR2 81 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 IZUMO3Q5VZ72 239 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-208ENST00000640135 RUSC1Q9BVN2 902 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TRIM55Q9BYV6 548 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 TRIM15Q9C019 465 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ZFATQ9P243 1243 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 STK38LQ9Y2H1 464 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 SLC4A7Q9Y6M7 1214 aa11.58□□□□□ -0.56
SCN1B-208ENST00000640135 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms