RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HSD17B4P51659 736 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 MRPS9P82933 396 aaKnown RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 PTP4A2Q12974 167 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 BLMHQ13867 455 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ATP13A4Q4VNC1 1196 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CAPRIN2Q6IMN6 1127 aaKnown RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 AGGF1Q8N302 714 aaeCLIP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 BSNDQ8WZ55 320 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 SLC7A6OSQ96CW6 309 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 NAF1Q96HR8 494 aaKnown RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 VPS37BQ9H9H4 285 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 DNPEPQ9ULA0 475 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 DNALI1O14645 258 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 PRPF4O43172 522 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 LYPLA2O95372 231 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CYP1A1P04798 512 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 FGFR1P11362 822 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CA4P22748 312 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 RAD23BP54727 409 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 PDK4Q16654 411 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 SPOPLQ6IQ16 392 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 LONP2Q86WA8 852 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 KATNAL2Q8IYT4 538 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 LRRC8CQ8TDW0 803 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 C10orf82Q8WW14 230 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 TRIM11Q96F44 468 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 FBXL18Q96ME1 805 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 TBC1D10AQ9BXI6 508 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 GLIS2Q9BZE0 524 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CCPG1Q9ULG6 757 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 PCDHB2Q9Y5E7 798 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 A0A1W2PPM1 405 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ATP5HO75947 161 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 TCF4P15884 667 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CALB2P22676 271 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 MTMR1Q13613 665 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ZFYVE27Q5T4F4 411 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF622Q969S3 477 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 SMC6Q96SB8 1091 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 FAM213AQ9BRX8 229 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 UBN1Q9NPG3 1134 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 H0Y3Z8 333 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 LIASO43766 372 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 DCTN3O75935 186 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 UPP2O95045 317 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 PEX19P40855 299 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 NR1H3Q13133 447 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 DMP1Q13316 513 aaPredicted RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 C4orf19Q8IY42 314 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 TTC8Q8TAM2 541 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 STK32AQ8WU08 396 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 INPP5DQ92835 1189 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 HERC5Q9UII4 1024 aaKnown RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF148Q9UQR1 794 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 UBIAD1Q9Y5Z9 338 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF536O15090 1300 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ATP9AO75110 1047 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 BANF1O75531 89 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ATF7P17544 494 aaPredicted RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 GTF2H1P32780 548 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ARSEP51690 589 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 NFX1Q12986 1120 aaKnown RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 GPS1Q13098 491 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 MAMLD1Q13495 774 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 RGS9BPQ6ZS82 235 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ENOSF1Q7L5Y1 443 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 TDRPQ86YL5 185 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 ZBED8Q8IZ13 594 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 GPD1LQ8N335 351 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 NUDCD1Q96RS6 583 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 TIPINQ9BVW5 301 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
SNIP1-204ENST00000638725 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
SNIP1-204ENST00000638725 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 TLR3O15455 904 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 LUC7L3O95232 432 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 CCNE2O96020 404 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 ALDH3A1P30838 453 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 WNT7BP56706 349 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 PSMC5P62195 406 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 NOMO3P69849 1222 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 GRIK3Q13003 919 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 TAF1BQ53T94 588 aaPredicted RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms