RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 IQGAP3Q86VI3 1631 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CRB1P82279 1406 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 PYGLP06737 847 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 GNAT1P11488 350 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 NQO1P15559 274 aaKnown RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 EFNA5P52803 228 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 NR1H4Q96RI1 486 aaPredicted RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 JPH1Q9HDC5 661 aaPredicted RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 LOC100653049A0A140TA62 436 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 KIAA0391O15091 583 aaKnown RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 KRT34O76011 436 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 GEMIN4P57678 1058 aaKnown RBP19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CDK17Q00537 523 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 IFNEQ86WN2 208 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CNTNAP5Q8WYK1 1306 aa19.38■□□□□ 0.69
SCARB2-213ENST00000638680 CYLC2Q14093 348 aaPredicted RBP19.37■□□□□ 0.69
SCARB2-213ENST00000638680 ZNF235Q14590 738 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 BTBD8Q5XKL5 378 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 KCNB2Q92953 911 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 TMEM143Q96AN5 459 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 DNAJC7Q99615 494 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 EPAS1Q99814 870 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 TBC1D4O60343 1298 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 SPP2Q13103 211 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 USP33Q8TEY7 942 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 DUSP10Q9Y6W6 482 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 CD44P16070 742 aaKnown RBP19.37■□□□□ 0.69
SCARB2-213ENST00000638680 HSD17B4P51659 736 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 NLRP11P59045 1033 aaKnown RBP19.37■□□□□ 0.69
SCARB2-213ENST00000638680 OVGP1Q12889 678 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 TTLL6Q8N841 843 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 PTPRN2Q92932 1015 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 NEUROG2Q9H2A3 272 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 PNMA3Q9UL41 463 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 PHTF1Q9UMS5 762 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 TLR2O60603 784 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 SPAG6O75602 509 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 SCTRP47872 440 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 ITIH4Q14624 930 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 DCAF4L1Q3SXM0 396 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 MOSPD1Q9UJG1 213 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 CDC42BPBQ9Y5S2 1711 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 QRICH2Q9H0J4 1663 aa19.37■□□□□ 0.69
SCARB2-213ENST00000638680 ZNF189O75820 626 aaPredicted RBP19.36■□□□□ 0.69
SCARB2-213ENST00000638680 VCAM1P19320 739 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SMTNL2Q2TAL5 461 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SPATA18Q8TC71 538 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 GANCQ8TET4 914 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 ASIC4Q96FT7 647 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 TMBIM4Q9HC24 238 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 AGAP1Q9UPQ3 857 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 ASAP3Q8TDY4 903 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 THAP2Q9H0W7 228 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 VCPKMTQ9H867 229 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 PAK5Q9P286 719 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 H3BQF6 201 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 RALAP11233 206 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 PDAP1Q13442 181 aaKnown RBP19.36■□□□□ 0.69
SCARB2-213ENST00000638680 LRRC8BQ6P9F7 803 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 C3orf20Q8ND61 904 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 PLA2G12BQ9BX93 195 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 ARHGEF38Q9NXL2 777 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 TBX3O15119 743 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 HMOX2P30519 316 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 CTCFP49711 727 aaPredicted RBP19.36■□□□□ 0.69
SCARB2-213ENST00000638680 DSG1Q02413 1049 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 KRT72Q14CN4 511 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 RCN1Q15293 331 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 EPC2Q52LR7 807 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SBK1Q52WX2 424 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 TRIM54Q9BYV2 358 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SLC26A4O43511 780 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 VCPP55072 806 aaKnown RBP19.36■□□□□ 0.69
SCARB2-213ENST00000638680 TMCO5AQ8N6Q1 288 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SEPT8Q92599 483 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 SLC10A4Q96EP9 437 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 CNBD2Q96M20 576 aa19.36■□□□□ 0.69
SCARB2-213ENST00000638680 PABPC3Q9H361 631 aaKnown RBP19.36■□□□□ 0.69
SCARB2-213ENST00000638680 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 EIF3DO15371 548 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PLOD1Q02809 727 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 CACNB2Q08289 660 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 DALRD3Q5D0E6 543 aaKnown RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 C6orf10Q5SRN2 563 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 CLEC10AQ8IUN9 316 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PPIL6Q8IXY8 311 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 ZNF560Q96MR9 790 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 HAO1Q9UJM8 370 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 GRID1Q9ULK0 1009 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 PAIP2BQ9ULR5 123 aaKnown RBP19.35■□□□□ 0.69
SCARB2-213ENST00000638680 POLIQ9UNA4 740 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 GRAP2O75791 330 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 ACADSP16219 412 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 FLT1P17948 1338 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 AP3B1O00203 1094 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 CST8O60676 142 aa19.35■□□□□ 0.69
SCARB2-213ENST00000638680 CAND2O75155 1236 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms