RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
CACNA1D-228ENST00000638120 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
CACNA1D-228ENST00000638120 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 PGK1P00558 417 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 RARBP10826 455 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 SP3Q02447 781 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 TRIM32Q13049 653 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 BRD3Q15059 726 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 EIF2AQ9BY44 585 aaKnown RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 DERAQ9Y315 318 aa13.08□□□□□ -0.32
CACNA1D-228ENST00000638120 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 CFHP08603 1231 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 WDR93Q6P2C0 686 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 TMCO3Q6UWJ1 677 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 CPA5Q8WXQ8 436 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 SNX27Q96L92 541 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 GTF2IRD1Q9UHL9 959 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
CACNA1D-228ENST00000638120 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 VSNL1P62760 191 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 PHF13Q86YI8 300 aaPredicted RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 RASGEF1CQ8N431 466 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 VCPIP1Q96JH7 1222 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 RPS6KC1Q96S38 1066 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 DPP3Q9NY33 737 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 PGRMC1O00264 195 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CEP104O60308 925 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 P4HA1P13674 534 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 RAP1GAPP47736 663 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 MESDQ14696 234 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 ZNF394Q53GI3 561 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CCDC70Q6NSX1 233 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 HNRNPLLQ8WVV9 542 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 HPDLQ96IR7 371 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CELF4Q9BZC1 486 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 SDCBP2Q9H190 292 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CARD9Q9H257 536 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 NXF3Q9H4D5 531 aaKnown RBP13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 XPNPEP3Q9NQH7 507 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
CACNA1D-228ENST00000638120 TRIP11Q15643 1979 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 RECQL4O94761 1208 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 PAEPP09466 180 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 RRM1P23921 792 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 MCM3P25205 808 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 RBP5P82980 135 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 RUBCNQ92622 972 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 ARFGAP3Q9NP61 516 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms