RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 DEAF1O75398 565 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 NDUFA10O95299 355 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 SDC4P31431 198 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 ALKBH4Q9NXW9 302 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 RARS2Q5T160 578 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 OMA1Q96E52 524 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 TBC1D23Q9NUY8 699 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CLIP3Q96DZ5 547 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 HDHD2Q9H0R4 259 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 ZBTB22O15209 634 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 EGFRP00533 1210 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 UBAP1Q9NZ09 502 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 POLR1DQ9Y2S0 133 aa17.08■□□□□ 0.33
CACNA1A-258ENST00000638029 NR1H3Q13133 447 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 IQCF2Q8IXL9 164 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 POLE3Q9NRF9 147 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 SLC30A1Q9Y6M5 507 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 MED8Q96G25 268 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 SIKE1Q9BRV8 207 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 NDST4Q9H3R1 872 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 PGK2P07205 417 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 PGS1Q32NB8 556 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 LMBRD2Q68DH5 695 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 OR8H2Q8N162 312 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 OLFM1Q99784 485 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 APOL1O14791 398 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 MAGOHP61326 146 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 OTOAQ7RTW8 1153 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 ATPAF2Q8N5M1 289 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
CACNA1A-258ENST00000638029 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 TK2O00142 265 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 KCNB1Q14721 858 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 RBM41Q96IZ5 413 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SH2B2O14492 632 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 STRNO43815 780 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 NME5P56597 212 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 NLRP10Q86W26 655 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 FHOD1Q9Y613 1164 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 PIPSLA2A3N6 862 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 CDH6P55285 790 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 NLRP14Q86W24 1093 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 MIR1-1HGQ9H1L0 117 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 ZBTB39O15060 712 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 CALB1P05937 261 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 HSMCR30P0CW71 290 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 TAF5Q15542 800 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 ASAP3Q8TDY4 903 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SCFD1Q8WVM8 642 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 NACC2Q96BF6 587 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 FAM167AQ96KS9 214 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SLC9A2Q9UBY0 812 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SLC9A8Q9Y2E8 581 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 TDRKHQ9Y2W6 561 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SERPINB1P30740 379 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 DCAF4Q8WV16 495 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 E9PBE3 544 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 CHRM3P20309 590 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 IZUMO1Q8IYV9 350 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 NPHS2Q9NP85 383 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 MRPL40Q9NQ50 206 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 PCDHB9Q9Y5E1 797 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 SPACA6W5XKT8 324 aa17.07■□□□□ 0.32
CACNA1A-258ENST00000638029 RPS6KA5O75582 802 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 KAT2BQ92831 832 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 TUBGCP3Q96CW5 907 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 CCSAPQ6IQ19 270 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 C11orf70Q9BRQ4 267 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 ADI1Q9BV57 179 aa17.06■□□□□ 0.32
CACNA1A-258ENST00000638029 STOML1Q9UBI4 398 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms