RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PRPF4O43172 522 aaKnown RBP eCLIP15.43■□□□□ 0.067e-12■■■■■ 39.4
CLN6-215ENST00000636674 EXTL3O43909 919 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 WFS1O76024 890 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 EIF2AK2P19525 551 aaKnown RBP15.43■□□□□ 0.06
CLN6-215ENST00000636674 ACO1P21399 889 aaKnown RBP15.43■□□□□ 0.06
CLN6-215ENST00000636674 CCND1P24385 295 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 SLC8A3P57103 927 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 TAS2R40P59535 323 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 IL9RQ01113 521 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 MGAT5Q09328 741 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 CCDC142Q17RM4 750 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 SRRM1Q8IYB3 904 aaKnown RBP15.43■□□□□ 0.06
CLN6-215ENST00000636674 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 AGAP11Q8TF27 550 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 ZNF516Q92618 1163 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 CFAP57Q96MR6 1250 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 PPCSQ9HAB8 311 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 PXMP2Q9NR77 195 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 C15orf41Q9Y2V0 281 aa15.43■□□□□ 0.06
CLN6-215ENST00000636674 DKC1O60832 514 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLN6-215ENST00000636674 STBD1O95210 358 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 ASMTLO95671 621 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 KRT16P08779 473 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 MAGEA4P43358 317 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 RPS6P62753 249 aaKnown RBP15.42■□□□□ 0.06
CLN6-215ENST00000636674 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
CLN6-215ENST00000636674 MAMLD1Q13495 774 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 CRYMQ14894 314 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 RASA2Q15283 850 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 ZKSCAN8Q15776 578 aaPredicted RBP15.42■□□□□ 0.06
CLN6-215ENST00000636674 WDR44Q5JSH3 913 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 ANKS1BQ7Z6G8 1248 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 TRABD2AQ86V40 505 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 MAB21L3Q8N8X9 362 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 TBC1D31Q96DN5 1066 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 PWWP2AQ96N64 755 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 MLXIPLQ9NP71 852 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 DONSONQ9NYP3 566 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 NOP53Q9NZM5 478 aaKnown RBP15.42■□□□□ 0.06
CLN6-215ENST00000636674 SENP1Q9P0U3 644 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 CNTN6Q9UQ52 1028 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 STARD13Q9Y3M8 1113 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 PCDHA10Q9Y5I2 948 aa15.42■□□□□ 0.06
CLN6-215ENST00000636674 RASA4BC9J798 803 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 DNALI1O14645 258 aaPredicted RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 RASA4O43374 803 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 DGAT1O75907 488 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 UNC5CO95185 931 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 SBF1O95248 1867 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 CALCAP01258 141 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 C4BPAP04003 597 aaKnown RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 VPS41P49754 854 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 WDR4P57081 412 aaKnown RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 KIAA1217Q5T5P2 1943 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 TAS1R3Q7RTX0 852 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ECHDC2Q86YB7 292 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ABRAQ8N0Z2 381 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 C9orf72Q96LT7 481 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 RBM15Q96T37 977 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■■□ 25.8
CLN6-215ENST00000636674 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 HEMGNQ9BXL5 484 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 TMEM39BQ9GZU3 492 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 GGT7Q9UJ14 662 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 STYXL1Q9Y6J8 313 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 FOXO6A8MYZ6 492 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 NDC80O14777 642 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 GCAP28676 217 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 FOXN2P32314 431 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 DSG3P32926 999 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 CETN2P41208 172 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 MSH2P43246 934 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 MCL1Q07820 350 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 LLGL2Q6P1M3 1020 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 DENND1AQ8TEH3 1009 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 FBF1Q8TES7 1133 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ATP6V0A1Q93050 837 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ELMO3Q96BJ8 720 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 GPRASP2Q96D09 838 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 RBM41Q96IZ5 413 aaKnown RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 RSRC1Q96IZ7 334 aaKnown RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 CEP170P1Q96L14 293 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 RMDN3Q96TC7 470 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 TXLNGQ9NUQ3 528 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ADAM22Q9P0K1 906 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
CLN6-215ENST00000636674 TBK1Q9UHD2 729 aa15.41■□□□□ 0.06
CLN6-215ENST00000636674 MAFGO15525 162 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 LIASO43766 372 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 ZNF862O60290 1169 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 ATP5HO75947 161 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 PTPN7P35236 360 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms