RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.21■□□□□ 0.35
CLCN2-215ENST00000636661 HUS1O60921 280 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 ALDH18A1P54886 795 aaKnown RBP17.21■□□□□ 0.35
CLCN2-215ENST00000636661 AP1ARQ63HQ0 302 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 BAP1Q92560 729 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
CLCN2-215ENST00000636661 ZC3H7BQ9UGR2 993 aaKnown RBP17.21■□□□□ 0.35
CLCN2-215ENST00000636661 P4HA2O15460 535 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 ACTR2P61160 394 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 TTMPQ5BVD1 217 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.34
CLCN2-215ENST00000636661 TSSK1BQ9BXA7 367 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 C2orf40Q9H1Z8 148 aa17.21■□□□□ 0.34
CLCN2-215ENST00000636661 RARGP13631 454 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 EFNA5P52803 228 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 RGS9BPQ6ZS82 235 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SKA2Q8WVK7 121 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SRGAP2BP0DMP2 458 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 KRT4P19013 534 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 CAP2P40123 477 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 OCRLQ01968 901 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 ECM1Q16610 540 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 OTOP1Q7RTM1 612 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 LONP2Q86WA8 852 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SLC26A7Q8TE54 656 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SEPT1Q8WYJ6 367 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 PSMC3IPQ9P2W1 217 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 PGM1P36871 562 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 PPATQ06203 517 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SPOUT1Q5T280 376 aaKnown RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 COL23A1Q86Y22 540 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 RNF135Q8IUD6 432 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 C4orf32Q8N8J7 132 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 TIPINQ9BVW5 301 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 ROPN1BQ9BZX4 212 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 ROPN1Q9HAT0 212 aaPredicted RBP17.2■□□□□ 0.34
CLCN2-215ENST00000636661 SENP1Q9P0U3 644 aa17.2■□□□□ 0.34
CLCN2-215ENST00000636661 OATP04181 439 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 MX2P20592 715 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SCTRP47872 440 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 FNTAP49354 379 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 PTENP60484 403 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TMC3Q7Z5M5 1100 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 GMCL1Q96IK5 515 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 PJA2O43164 708 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 CSPG5O95196 566 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ICAM1P05362 532 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 RARRES1P49788 294 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 STX1BP61266 288 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SYDE1Q6ZW31 735 aaPredicted RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 BZW1Q7L1Q6 419 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 PACS2Q86VP3 889 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TMEM121Q9BTD3 319 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 PCMTD2Q9NV79 361 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ZFATQ9P243 1243 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ZNF263O14978 683 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SLC26A4O43511 780 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 GJB6O95452 261 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 RPL21P46778 160 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 Q4G0T1 1027 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ATP6V1E2Q96A05 226 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 MTMR12Q9C0I1 747 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
CLCN2-215ENST00000636661 EXTL3O43909 919 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 CUL2Q13617 745 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 EMC1Q8N766 993 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TSC22D3Q99576 134 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 SHCBP1LQ9BZQ2 653 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 BFARQ9NZS9 450 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 TMX2Q9Y320 296 aa17.19■□□□□ 0.34
CLCN2-215ENST00000636661 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLCN2-215ENST00000636661 COPS2P61201 443 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 TNFAIP2Q03169 654 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 PTK7Q13308 1070 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 PIGHQ14442 188 aaPredicted RBP17.18■□□□□ 0.34
CLCN2-215ENST00000636661 TEX2Q8IWB9 1127 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 CEP120Q8N960 986 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 PDZD8Q8NEN9 1154 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 EPS15L1Q9UBC2 864 aa17.18■□□□□ 0.34
CLCN2-215ENST00000636661 RFC1P35251 1148 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms