RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 AKIRIN2Q53H80 203 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 DDI2Q5TDH0 399 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 TRIP4Q15650 581 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 SH3BP5LQ7L8J4 393 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 PARK7Q99497 189 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 CPA4Q9UI42 421 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 NUP160Q12769 1436 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 CYP2E1P05181 493 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 DEPDC7Q96QD5 511 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 SENP7Q9BQF6 1050 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 PSMD14O00487 310 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 FCGRTP55899 365 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 P4HBP07237 508 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 AKR1B1P15121 316 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 TP53BP2Q13625 1128 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 GLB1LQ6UWU2 654 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 ZNF512BQ96KM6 892 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 PRMT1Q99873 361 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM39BQ9GZU3 492 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 XPO7Q9UIA9 1087 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 EML3Q32P44 896 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 IZUMO3Q5VZ72 239 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 VTI1BQ9UEU0 232 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 PMPCBO75439 489 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 CDKL3Q8IVW4 592 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 NBPF15Q8N660 670 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 PARD6BQ9BYG5 372 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 CHST12Q9NRB3 414 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 TNIP3Q96KP6 325 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 TFDP2Q14188 446 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 SNX17Q15036 470 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 DDX47Q9H0S4 455 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 NPHS2Q9NP85 383 aa18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 PAIP2BQ9ULR5 123 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-227ENST00000636549 KLHL18O94889 574 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 CCNE1P24864 410 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RNF180Q86T96 592 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 NT5DC4Q86YG4 428 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 METTL5Q9NRN9 209 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 ZFATQ9P243 1243 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 MYOM2P54296 1465 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RAP1GAPP47736 663 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 NEK2P51955 445 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 MED21Q13503 144 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 DDI1Q8WTU0 396 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 KLF6Q99612 283 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 FAM129AQ9BZQ8 928 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 EPC1Q9H2F5 836 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 TBC1D22BQ9NU19 505 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RRP15Q9Y3B9 282 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 ATP12AP54707 1039 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 PARVAQ9NVD7 372 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 BFARQ9NZS9 450 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 SRPRBQ9Y5M8 271 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 AIM2O14862 343 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 KDM1AO60341 852 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 FLT3P36888 993 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 ADCY2Q08462 1091 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 NLRP9Q7RTR0 991 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RNASE11Q8TAA1 199 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 CASTOR2A6NHX0 329 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 C3orf70A6NLC5 250 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 GH1P01241 217 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 PLOD1Q02809 727 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RELTQ969Z4 430 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 NACC2Q96BF6 587 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 REXO4Q9GZR2 422 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
CACNA1A-227ENST00000636549 KATNAL1Q9BW62 490 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM117Q9H0C3 514 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 STRNO43815 780 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 CSDE1O75534 798 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 CYP2C9P11712 490 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 KRT76Q01546 638 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 KNOP1Q1ED39 458 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 FAXCQ5TGI0 409 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 ELMO3Q96BJ8 720 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 WWOXQ9NZC7 414 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 RRN3P2A6NIE6 340 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 FGFR2P21802 821 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 CAPRIN2Q6IMN6 1127 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 ARHGEF3Q9NR81 526 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 F8W810 466 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 CSF1RP07333 972 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 ETF1P62495 437 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 ZNF438Q7Z4V0 828 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 POMGNT2Q8NAT1 580 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 PRKAB1Q9Y478 270 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 SMNDC1O75940 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM154Q6P9G4 183 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 MTFMTQ96DP5 389 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 COL15A1P39059 1388 aa18.67■□□□□ 0.58
CACNA1A-227ENST00000636549 HEATR9A2RTY3 570 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms