RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 SYBUQ9NX95 663 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 AP1G2O75843 785 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 CLPTM1O96005 669 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 NUP107P57740 925 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 SESN2P58004 480 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 CENPCQ03188 943 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 MTHFD1LQ6UB35 978 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 C3orf62Q6ZUJ4 267 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 DDIASQ8IXT1 998 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 EPS8L3Q8TE67 593 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ARHGEF26Q96DR7 871 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 EML4Q9HC35 981 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF302Q9NR11 478 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ARHGEF37A1IGU5 675 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 NFIBO00712 420 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 SLC26A4O43511 780 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 APRTP07741 180 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 SERPINB9P50453 376 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 STXBP2Q15833 593 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF507Q8TCN5 953 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF512BQ96KM6 892 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 FAM210AQ96ND0 272 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 OLA1Q9NTK5 396 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 MCM8Q9UJA3 840 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 UBOX5O94941 541 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CLK1P49759 484 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 RPS6P62753 249 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 PLOD1Q02809 727 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 MAPK7Q13164 816 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 EFHC2Q5JST6 749 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 MRPL4Q9BYD3 311 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 UNC45AQ9H3U1 944 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 RAB6BQ9NRW1 208 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 STMN3Q9NZ72 180 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DMGDHQ9UI17 866 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 PHTF1Q9UMS5 762 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CAND2O75155 1236 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 EZH2Q15910 746 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 IMPG1Q17R60 797 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CATSPER4Q7RTX7 472 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 PID1Q7Z2X4 250 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 RNF217Q8TC41 542 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 TUBGCP3Q96CW5 907 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 HADHAP40939 763 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 NLRP11P59045 1033 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 KCNA1Q09470 495 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DMC1Q14565 340 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CAVIN3Q969G5 261 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 IFT43Q96FT9 208 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 COQ7Q99807 217 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 ATP9BO43861 1147 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 IFNA8P32881 189 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 PHKA2P46019 1235 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DUOXA2Q1HG44 320 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 FOXR1Q6PIV2 292 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 IZUMO2Q6UXV1 221 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 NDEL1Q9GZM8 345 aa12.23□□□□□ -0.45
COL11A1-211ENST00000635193 FAM217BQ9NTX9 383 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 CAB39Q9Y376 341 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-211ENST00000635193 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 A0A087X0T9 212 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SPAG6O75602 509 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 FAM228BP0C875 321 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 CDH2P19022 906 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TCN1P20061 433 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 YWHABP31946 246 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 FNTAP49354 379 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 COPAP53621 1224 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 CDK17Q00537 523 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 RUNX1T1Q06455 604 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF786Q8N393 782 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TTC39CQ8N584 583 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TEX12Q9BXU0 123 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 LACRTQ9GZZ8 138 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 C2orf40Q9H1Z8 148 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 HACD3Q9P035 362 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 BTBD7Q9P203 1132 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 TMEM247A6NEH6 219 aa12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SRP72O76094 671 aaKnown RBP12.22□□□□□ -0.45
COL11A1-211ENST00000635193 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms