RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 OXCT2Q9BYC2 517 aaPredicted RBP15.92■□□□□ 0.14
CDC42BPB-209ENST00000634889 MTRRQ9UBK8 725 aa15.92■□□□□ 0.14
CDC42BPB-209ENST00000634889 DPP7Q9UHL4 492 aa15.92■□□□□ 0.14
CDC42BPB-209ENST00000634889 BACE2Q9Y5Z0 518 aa15.92■□□□□ 0.14
CDC42BPB-209ENST00000634889 PPP1R3GB7ZBB8 358 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 H7C4K7 107 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 AKAP3O75969 853 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 ODC1P11926 461 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 CD44P16070 742 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 TYMPP19971 482 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 CCNE1P24864 410 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 POLR2BP30876 1174 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 PSMC2P35998 433 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 RBP5P82980 135 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 FKBP3Q00688 224 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 MRPL58Q14197 206 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 VARS2Q5ST30 1063 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 ANKRD40Q6AI12 368 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 ELMSAN1Q6PJG2 1045 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 DSTYKQ6XUX3 929 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 INTS8Q75QN2 995 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 ZC3H3Q8IXZ2 948 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 MSLNLQ96KJ4 702 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 CLSTN3Q9BQT9 956 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 GZF1Q9H116 711 aaPredicted RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 DZANK1Q9NVP4 752 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 CLEC1BQ9P126 229 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 SIX4Q9UIU6 781 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 BARX2Q9UMQ3 279 aaPredicted RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 R3HCC1Q9Y3T6 440 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 TSC2P49815 1807 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 PLXNA3P51805 1871 aa15.91■□□□□ 0.14
CDC42BPB-209ENST00000634889 SCN1AP35498 2009 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 BICDL2A1A5D9 508 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 KPNA7A9QM74 516 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 IKBKBO14920 756 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 CETN3O15182 167 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 SPTLC1O15269 473 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 SLC16A3O15427 465 aaKnown RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 OAZ2O95190 189 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 GLUD1P00367 558 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 CYP11A1P05108 521 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 KRT19P08727 400 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 HOXB8P17481 243 aaPredicted RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 TFF2Q03403 129 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 YWHAHQ04917 246 aaPredicted RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 DLX2Q07687 328 aaPredicted RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 PUS10Q3MIT2 529 aaKnown RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 LMBRD2Q68DH5 695 aaPredicted RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 ANKRD54Q6NXT1 300 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 LLGL2Q6P1M3 1020 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 TRAPPC11Q7Z392 1133 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 FAM186BQ8IYM0 893 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 SENP8Q96LD8 212 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 ASB2Q96Q27 587 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 POP1Q99575 1024 aaKnown RBP15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 CD207Q9UJ71 328 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 DSEQ9UL01 958 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 AGAP1Q9UPQ3 857 aa15.9■□□□□ 0.14
CDC42BPB-209ENST00000634889 LRRIQ3A6PVS8 624 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 H3BQ06 376 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 TBC1D4O60343 1298 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 KRT13P13646 458 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 EPCAMP16422 314 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 RPL17P18621 184 aaKnown RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 VAMP7P51809 220 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 RBM10P98175 930 aaKnown RBP15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 BFSP1Q12934 665 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 RAB33AQ14088 237 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 ZNF280DQ6N043 979 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 SMRP1Q8NCR6 262 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 PLEKHO2Q8TD55 490 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 HDAC7Q8WUI4 952 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 BORCS6Q96GS4 357 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 GDAP2Q9NXN4 497 aa15.89■□□□□ 0.13
CDC42BPB-209ENST00000634889 TRIM49BA6NDI0 452 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 CYB561D2O14569 222 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 TGM5O43548 720 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 DLG4P78352 724 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 PAK1Q13153 545 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 CTXN3Q4LDR2 81 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 LILRA6Q6PI73 481 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 MLKLQ8NB16 471 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 ZNF516Q92618 1163 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 FAM84AQ96KN4 292 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 CEP63Q96MT8 703 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 PLEKHA4Q9H4M7 779 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 SFXN1Q9H9B4 322 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 FBXL5Q9UKA1 691 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 CTNND2Q9UQB3 1225 aa15.88■□□□□ 0.13
CDC42BPB-209ENST00000634889 FAM50BQ9Y247 325 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms