RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CCDC169A6NNP5 214 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 MUTP22033 750 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 SOX9P48436 509 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 FCHO2Q0JRZ9 810 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 ANKRD1Q15327 319 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 AASDHQ4L235 1098 aaPredicted RBP22.02■■□□□ 1.12
TARDBP-228ENST00000629725 DGKKQ5KSL6 1271 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 HAUS3Q68CZ6 603 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 TBC1D32Q96NH3 1257 aa22.02■■□□□ 1.12
TARDBP-228ENST00000629725 MRPL4Q9BYD3 311 aaKnown RBP22.02■■□□□ 1.12
TARDBP-228ENST00000629725 SPAG17Q6Q759 2223 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 A0A1W2PRU2 124 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 MYBPHLA2RUH7 354 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 FAM200AQ8TCP9 573 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 RSPRY1Q96DX4 576 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 TCHPQ9BT92 498 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 YIPF1Q9Y548 306 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 CACNA1GO43497 2377 aa22.01■■□□□ 1.11
TARDBP-228ENST00000629725 SDK1Q7Z5N4 2213 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 WDFY3Q8IZQ1 3526 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 SPECC1L-ADORA2AF8WAN1 911 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 OR52Z1P0C646 297 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 MCF2P10911 925 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 MARCKSP29966 332 aaPredicted RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 NPTX2P47972 431 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 LIMK1P53667 647 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 PEX3P56589 373 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 ECM1Q16610 540 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 WDR44Q5JSH3 913 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 TXNDC11Q6PKC3 985 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 RALGPS2Q86X27 583 aaPredicted RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 NSUN7Q8NE18 718 aaKnown RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 GTF3C6Q969F1 213 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 TARS2Q9BW92 718 aaKnown RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 TMEM134Q9H6X4 195 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 C2orf42Q9NWW7 574 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 PCDHB8Q9UN66 801 aa22■■□□□ 1.11
TARDBP-228ENST00000629725 NUP210Q8TEM1 1887 aaPredicted RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 KIF26AQ9ULI4 1882 aaPredicted RBP22■■□□□ 1.11
TARDBP-228ENST00000629725 HOXA6P31267 233 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 CTHP32929 405 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 CCT6AP40227 531 aaKnown RBP21.99■■□□□ 1.11
TARDBP-228ENST00000629725 YWHAHQ04917 246 aaPredicted RBP21.99■■□□□ 1.11
TARDBP-228ENST00000629725 PLD1Q13393 1074 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 ME3Q16798 604 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 WDR5BQ86VZ2 330 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 TMC8Q8IU68 726 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 ARID3BQ8IVW6 561 aaPredicted RBP21.99■■□□□ 1.11
TARDBP-228ENST00000629725 C12orf50Q8NA57 414 aaPredicted RBP21.99■■□□□ 1.11
TARDBP-228ENST00000629725 BEST2Q8NFU1 509 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 TTC8Q8TAM2 541 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 LRRC3Q9BY71 257 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 GTSE1Q9NYZ3 720 aa21.99■■□□□ 1.11
TARDBP-228ENST00000629725 AXIN1O15169 862 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 PROZP22891 400 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 PMLP29590 882 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 EPHB3P54753 998 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 DMP1Q13316 513 aaPredicted RBP21.98■■□□□ 1.11
TARDBP-228ENST00000629725 CCINQ13939 588 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 PON2Q15165 354 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 STXBP5Q5T5C0 1151 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 N4BP2L1Q5TBK1 243 aaPredicted RBP21.98■■□□□ 1.11
TARDBP-228ENST00000629725 MPZL3Q6UWV2 235 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 TAS1R3Q7RTX0 852 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 GPIHBP1Q8IV16 184 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 SYNPOQ8N3V7 929 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 PGLYRP2Q96PD5 576 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 ARRDC1-AS1Q9H2J1 176 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 ARHGAP28Q9P2N2 729 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 KIAA1024Q9UPX6 916 aa21.98■■□□□ 1.11
TARDBP-228ENST00000629725 DPYSL4O14531 572 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 MEFVO15553 781 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 JAK2O60674 1132 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 HARSP12081 509 aaKnown RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 DUSP4Q13115 394 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 ORC2Q13416 577 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 SF3A2Q15428 464 aaKnown RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 ZNF174Q15697 407 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 ARHGAP29Q52LW3 1261 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 HAUS6Q7Z4H7 955 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 ZFYVE19Q96K21 471 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 OXCT2Q9BYC2 517 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 DNAJC25Q9H1X3 360 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 KMT5AQ9NQR1 393 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 RBM19Q9Y4C8 960 aaKnown RBP21.97■■□□□ 1.11
TARDBP-228ENST00000629725 CEP295Q9C0D2 2601 aa21.97■■□□□ 1.11
TARDBP-228ENST00000629725 ABLIM1O14639 778 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 TM4SF5O14894 197 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 OAZ2O95190 189 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 LARGE1O95461 756 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 VNN2O95498 520 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 OR4Q2P0C623 313 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 ZNF806P0C7X5 589 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 HOXC13P31276 330 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 ALDH1A3P47895 512 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 SHC2P98077 582 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 SAFBQ15424 915 aaKnown RBP eCLIP21.96■■□□□ 1.11
TARDBP-228ENST00000629725 CCDC6Q16204 474 aa21.96■■□□□ 1.11
TARDBP-228ENST00000629725 SLC10A6Q3KNW5 377 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms