RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CBWD2Q8IUF1 395 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 TMEM130Q8N3G9 435 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 SENP8Q96LD8 212 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 RHOBTB2Q9BYZ6 727 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 CD320Q9NPF0 282 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 MYO10Q9HD67 2058 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 VCANP13611 3396 aa18.1■□□□□ 0.49
UBE3D-208ENST00000626828 PPEF2O14830 753 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 ZMYND10O75800 440 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 TYMPP19971 482 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 TAF6P49848 677 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 CYP2J2P51589 502 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 WNT7BP56706 349 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
UBE3D-208ENST00000626828 DUOXA2Q1HG44 320 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 CTXN3Q4LDR2 81 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 RSPO2Q6UXX9 243 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-208ENST00000626828 ELOA2Q8IYF1 753 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-208ENST00000626828 ZNF461Q8TAF7 563 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 TMEM174Q8WUU8 243 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 INTS13Q9NVM9 706 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 ZDHHC7Q9NXF8 308 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 FBXL5Q9UKA1 691 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 R3HCC1Q9Y3T6 440 aaKnown RBP18.09■□□□□ 0.49
UBE3D-208ENST00000626828 PLXNA3P51805 1871 aa18.09■□□□□ 0.49
UBE3D-208ENST00000626828 LOC730098B7Z3J9 87 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 EXOC3O60645 756 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 ABLIM3O94929 683 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 SMC2O95347 1197 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 PAPLNO95428 1278 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 WEE2P0C1S8 567 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 TMEM191BP0C7N4 346 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 PNPLA4P41247 253 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 RBP5P82980 135 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 YWHAHQ04917 246 aaPredicted RBP18.08■□□□□ 0.48
UBE3D-208ENST00000626828 MYBPC2Q14324 1141 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 ZNF280DQ6N043 979 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 SLC9A9Q8IVB4 645 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 RPGRIP1Q96KN7 1286 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 GSDMAQ96QA5 445 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 GTPBP4Q9BZE4 634 aaKnown RBP18.08■□□□□ 0.48
UBE3D-208ENST00000626828 PRKD2Q9BZL6 878 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 KCTD10Q9H3F6 313 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 DMAC2Q9NW81 257 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 RMND1Q9NWS8 449 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 FBXW11Q9UKB1 542 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 ITGA11Q9UKX5 1188 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 DSEQ9UL01 958 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 AGAP1Q9UPQ3 857 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 NR2E1Q9Y466 385 aa18.08■□□□□ 0.48
UBE3D-208ENST00000626828 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
UBE3D-208ENST00000626828 KPNA7A9QM74 516 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 SPTLC1O15269 473 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 CALUO43852 315 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-208ENST00000626828 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
UBE3D-208ENST00000626828 RFPL2O75678 378 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 TNNC2P02585 160 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 HNRNPA1P09651 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
UBE3D-208ENST00000626828 ODC1P11926 461 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 ELF1P32519 619 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 PNOCQ13519 176 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 SV2CQ496J9 727 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 TPGS2Q68CL5 300 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 CCDC149Q6ZUS6 474 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 GUF1Q8N442 669 aaKnown RBP18.07■□□□□ 0.48
UBE3D-208ENST00000626828 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 SMG7Q92540 1137 aaKnown RBP18.07■□□□□ 0.48
UBE3D-208ENST00000626828 BORCS6Q96GS4 357 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 MFSD14AQ96MC6 490 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 ZNF560Q96MR9 790 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 FNBP1Q96RU3 617 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 POMKQ9H5K3 350 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 PIDD1Q9HB75 910 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 MAFFQ9ULX9 164 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 TRAF3IP3Q9Y228 551 aa18.07■□□□□ 0.48
UBE3D-208ENST00000626828 OR6C75A6NL08 312 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 CYB561D2O14569 222 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 KINO60870 393 aaKnown RBP18.06■□□□□ 0.48
UBE3D-208ENST00000626828 GADD45BO75293 160 aaPredicted RBP18.06■□□□□ 0.48
UBE3D-208ENST00000626828 ITGB3P05106 788 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 CYP11A1P05108 521 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 ATF2P15336 505 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 TNNI1P19237 187 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 ARPP19P56211 112 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 ROR1Q01973 937 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 CYP24A1Q07973 514 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 PSMD6Q15008 389 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 PPM1LQ5SGD2 360 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 OVOS1Q6IE37 1185 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 METTL23Q86XA0 190 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 LRRC52Q8N7C0 313 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 CDH22Q9UJ99 828 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 PCDHA5Q9Y5H7 936 aa18.06■□□□□ 0.48
UBE3D-208ENST00000626828 DOCK6Q96HP0 2047 aa18.05■□□□□ 0.48
UBE3D-208ENST00000626828 C8AP07357 584 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms