RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 GCOM1H8Y6P7 765 aaPredicted RBP3.38□□□□□ -1.87
CHD2-203ENST00000625243 PPP6CO00743 305 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 RAB11FIP3O75154 756 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 ULK1O75385 1050 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 FKBP9O95302 570 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 CYP2D6P10635 497 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 KRT10P13645 584 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 MMP13P45452 471 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 PLCD1P51178 756 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 ZNF529Q6P280 563 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.38□□□□□ -1.87
CHD2-203ENST00000625243 FKBP9P1Q75LS8 142 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 NXPE1Q8N323 547 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 OR7D4Q8NG98 312 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 SLC30A5Q8TAD4 765 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 STON2Q8WXE9 905 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 LPIN2Q92539 896 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 PAWRQ96IZ0 340 aaKnown RBP3.38□□□□□ -1.87
CHD2-203ENST00000625243 PGBD1Q96JS3 809 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 MS4A5Q9H3V2 200 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 TYW1Q9NV66 732 aaKnown RBP3.38□□□□□ -1.87
CHD2-203ENST00000625243 FAM30AQ9NZY2 134 aa3.38□□□□□ -1.87
CHD2-203ENST00000625243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 AKR1B10O60218 316 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 GUCY2FP51841 1108 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 MANFP55145 182 aaKnown RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 NOMO3P69849 1222 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 NOMO1Q15155 1222 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 RABEP1Q15276 862 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 TXNRD1Q16881 649 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 ATP13A4Q4VNC1 1196 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 NOMO2Q5JPE7 1267 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 PITRM1Q5JRX3 1037 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 USP43Q70EL4 1123 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 MEPCEQ7L2J0 689 aaKnown RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 AFAP1L2Q8N4X5 818 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 ZNF610Q8N9Z0 462 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 Q8NA96 180 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 PRPF38AQ8NAV1 312 aaKnown RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 CASKIN2Q8WXE0 1202 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 TMEM125Q96AQ2 219 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 GPR101Q96P66 508 aaPredicted RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 PUS7LQ9H0K6 701 aaKnown RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 VPS16Q9H269 839 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 BCO1Q9HAY6 547 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 INTS13Q9NVM9 706 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 SLC5A4Q9NY91 659 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 DDX56Q9NY93 547 aaKnown RBP3.37□□□□□ -1.87
CHD2-203ENST00000625243 MOCS1Q9NZB8 636 aa3.37□□□□□ -1.87
CHD2-203ENST00000625243 TARM1B6A8C7 271 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 EYA4O95677 639 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 HNRNPCP07910 306 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD2-203ENST00000625243 IL2RBP14784 551 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 LSP1P33241 339 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 LSSP48449 732 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 LGALS4P56470 323 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 LINC00205P59089 165 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 STAT4Q14765 748 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 CEP78Q5JTW2 689 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 PXDC1Q5TGL8 231 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 FRMD7Q6ZUT3 714 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 NECAB2Q7Z6G3 386 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 STRA8Q7Z7C7 330 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 SPATS2Q86XZ4 545 aaKnown RBP3.36□□□□□ -1.87
CHD2-203ENST00000625243 KRT73Q86Y46 540 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 SMC1BQ8NDV3 1235 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 NUP133Q8WUM0 1156 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 UHRF1Q96T88 793 aaPredicted RBP3.36□□□□□ -1.87
CHD2-203ENST00000625243 KCTD10Q9H3F6 313 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 TUBA8Q9NY65 449 aaPredicted RBP3.36□□□□□ -1.87
CHD2-203ENST00000625243 SERGEFQ9UGK8 458 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 APOBEC2Q9Y235 224 aaKnown RBP3.36□□□□□ -1.87
CHD2-203ENST00000625243 NOC2LQ9Y3T9 749 aaKnown RBP3.36□□□□□ -1.87
CHD2-203ENST00000625243 SPEF1Q9Y4P9 236 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 PHLDB1Q86UU1 1377 aa3.36□□□□□ -1.87
CHD2-203ENST00000625243 ZNF891A8MT65 544 aaPredicted RBP3.35□□□□□ -1.87
CHD2-203ENST00000625243 NEMP1O14524 444 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 GPR39O43194 453 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 LPLP06858 475 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 PDGFRBP09619 1106 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 BPIP17213 487 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 GATA3P23771 443 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 ALDH1A3P47895 512 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 SESN3P58005 492 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 PHC1P78364 1004 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 DSG1Q02413 1049 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 FPGSQ05932 587 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 ITKQ08881 620 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 SEPT7Q16181 437 aaKnown RBP3.35□□□□□ -1.87
CHD2-203ENST00000625243 OTUD7BQ6GQQ9 843 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 Q6ZVL8 140 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 UBE3BQ7Z3V4 1068 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 FITM2Q8N6M3 262 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 MYCBPAPQ8TBZ2 947 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 RIN2Q8WYP3 895 aaPredicted RBP3.35□□□□□ -1.87
CHD2-203ENST00000625243 PPP1R10Q96QC0 940 aaKnown RBP3.35□□□□□ -1.87
CHD2-203ENST00000625243 TMEM79Q9BSE2 394 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 PCDHB1Q9Y5F3 818 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 WASHC2CQ9Y4E1 1318 aa3.35□□□□□ -1.87
CHD2-203ENST00000625243 A0A1W2PS29 197 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms