RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MARCOQ9UEW3 520 aaPredicted RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 TMCO1Q9UM00 188 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 COL18A1P39060 1754 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 USP17L10C9JJH3 530 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 CIB2O75838 187 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 LSAMPQ13449 338 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 SLC47A2Q86VL8 602 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 ZBED8Q8IZ13 594 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 MORC4Q8TE76 937 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 EURLQ9NYK6 297 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 NEU2Q9Y3R4 380 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 OR6B1O95007 311 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 RALAP11233 206 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 DESP17661 470 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 GCAP28676 217 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 DLG4P78352 724 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 KDSRQ06136 332 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 BTKQ06187 659 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 RASSF3Q86WH2 238 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 MYLK4Q86YV6 388 aaPredicted RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 THTPAQ9BU02 230 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 COL4A1P02462 1669 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 GOLGA8IPA6NC78 632 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 GOLGA8JA6NMD2 632 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 SPATA31C1P0DKV0 1188 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 MAN1A1P33908 653 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 BPIFB4P59827 614 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 CETN1Q12798 172 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 C1orf146Q5VVC0 180 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 RBM12BQ8IXT5 1001 aaKnown RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 TSSK1BQ9BXA7 367 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 EBF3Q9H4W6 596 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
PMS1-221ENST00000624204 ZSCAN5DPP0CG00 497 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 VAV1P15498 845 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 CDC16Q13042 620 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 TMED1Q13445 227 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 SATL1Q86VE3 508 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 NME8Q8N427 588 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 NAT14Q8WUY8 206 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 SLCO2A1Q92959 643 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 TUBB6Q9BUF5 446 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 OSBPL8Q9BZF1 889 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 SMYD3Q9H7B4 428 aa16.03■□□□□ 0.16
PMS1-221ENST00000624204 PCNTO95613 3336 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 RPA1P27694 616 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 SMARCA1P28370 1054 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 LMNB2Q03252 620 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 BFSP1Q12934 665 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 RIPOR1Q6ZS17 1223 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 SYDE1Q6ZW31 735 aaPredicted RBP16.02■□□□□ 0.16
PMS1-221ENST00000624204 FAM178BQ8IXR5 827 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 MIPOL1Q8TD10 442 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 TCP10LQ8TDR4 215 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 CCDC124Q96CT7 223 aaKnown RBP16.02■□□□□ 0.16
PMS1-221ENST00000624204 ANO3Q9BYT9 981 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 MANSC1Q9H8J5 431 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 CYLDQ9NQC7 956 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 ANKRD36CQ5JPF3 1778 aa16.02■□□□□ 0.16
PMS1-221ENST00000624204 PGM3O95394 542 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.15
PMS1-221ENST00000624204 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.15
PMS1-221ENST00000624204 AP2B1P63010 937 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.15
PMS1-221ENST00000624204 DDB1Q16531 1140 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 BMT2Q1RMZ1 405 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 TBC1D9BQ66K14 1250 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 FBXO27Q8NI29 283 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 CCDC110Q8TBZ0 833 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 TTC25Q96NG3 672 aa16.02■□□□□ 0.15
PMS1-221ENST00000624204 FCHO1O14526 889 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 COQ9O75208 318 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
PMS1-221ENST00000624204 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.01■□□□□ 0.15
PMS1-221ENST00000624204 TTC17Q96AE7 1141 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 MIS12Q9H081 205 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 AGPAT3Q9NRZ7 376 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 DDX18Q9NVP1 670 aaKnown RBP16.01■□□□□ 0.15
PMS1-221ENST00000624204 SENP1Q9P0U3 644 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 SLC17A7Q9P2U7 560 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 MYL2P10916 166 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 BMP3P12645 472 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms