RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 CHN1P15882 459 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 TCF4P15884 667 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 KLF1Q13351 362 aaPredicted RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 BRSK2Q8IWQ3 736 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 GPC2Q8N158 579 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 IMPG2Q9BZV3 1241 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 MAF1Q9H063 256 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 WHRNQ9P202 907 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 RASGRF2O14827 1237 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ASS1P00966 412 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 GJB1P08034 283 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ITGA8P53708 1063 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 LAMTOR4Q0VGL1 99 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 IFT88Q13099 833 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 C6orf118Q5T5N4 469 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 RHBDF2Q6PJF5 856 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ZPBP2Q6X784 338 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 OTUD6BQ8N6M0 293 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 ZBTB10Q96DT7 871 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 CNOT10Q9H9A5 744 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 PI4K2BG5E9Z4 385 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 KIAA0754O94854 1291 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 ITIH2P19823 946 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
TP53-227ENST00000622645 ADCY8P40145 1251 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 MMP13P45452 471 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 OSTNP61366 133 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
TP53-227ENST00000622645 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
TP53-227ENST00000622645 LONRF1Q17RB8 773 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 ATL2Q8NHH9 583 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 SNF8Q96H20 258 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 XPO6Q96QU8 1125 aaKnown RBP12.71□□□□□ -0.37
TP53-227ENST00000622645 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 CSADQ9Y600 493 aa12.71□□□□□ -0.37
TP53-227ENST00000622645 PSTPIP1O43586 416 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 GAS8O95995 478 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 TGFB3P10600 412 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 KRT10P13645 584 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 MMP8P22894 467 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ZNF132P52740 706 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.38
TP53-227ENST00000622645 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.38
TP53-227ENST00000622645 PTK6Q13882 451 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 WDR49Q8IV35 697 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 MAIP1Q8WWC4 291 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 SCLT1Q96NL6 688 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.38
TP53-227ENST00000622645 CCDC113Q9H0I3 377 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ELP3Q9H9T3 547 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 PARVAQ9NVD7 372 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 SCINQ9Y6U3 715 aa12.71□□□□□ -0.38
TP53-227ENST00000622645 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 EFNA5P52803 228 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 KYNUQ16719 465 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 TTC31Q49AM3 519 aaPredicted RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 KAZNQ674X7 775 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 MICALCLQ6ZW33 695 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 RHPN2Q8IUC4 686 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 UBR7Q8N806 425 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 CLMNQ96JQ2 1002 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 GPR20Q99678 358 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 TXNRD2Q9NNW7 524 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 SOCS7O14512 581 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 AGTP01019 485 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 PRKCBP05771 671 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 ATF2P15336 505 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 MAPK6Q16659 721 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 IER5Q5VY09 327 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms