RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PCSK6P29122 969 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 LIFRP42702 1097 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PTGER2P43116 358 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 CYP4A11Q02928 519 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 LRP8Q14114 963 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 KRT81Q14533 505 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 ARPINQ7Z6K5 226 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 NDUFAF2Q8N183 169 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PAF1Q8N7H5 531 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 LRRC57Q8N9N7 239 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CCDC110Q8TBZ0 833 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PIGBQ92521 554 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SPOCK2Q92563 424 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 APPBP2Q92624 585 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SYT17Q9BSW7 474 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 RRN3Q9NYV6 651 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 DNAJB4Q9UDY4 337 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 MTUS1Q9ULD2 1270 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CCPG1Q9ULG6 757 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 NR2E1Q9Y466 385 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 COL18A1P39060 1754 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 COL5A2P05997 1499 aaPredicted RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 CHD4Q14839 1912 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TTLL13PA6NNM8 815 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 BTNL10A8MVZ5 291 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS11-209ENST00000622309 FOXP2O15409 715 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 EDF1O60869 148 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 STAMBPO95630 424 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TFAP2AP05549 437 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 PPARGP37231 505 aaPredicted RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 UBA7P41226 1012 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 RPL21P46778 160 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 ASIC1P78348 528 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 MSLNQ13421 630 aaPredicted RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 PDAP1Q13442 181 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 TRMT5Q32P41 509 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD20A4Q4UJ75 823 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 C1orf146Q5VVC0 180 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 RAPH1Q70E73 1250 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 PODNQ7Z5L7 613 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 RAB3IL1Q8TBN0 382 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 LSM14BQ9BX40 385 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 CEP44Q9C0F1 390 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 PSTPIP2Q9H939 334 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 PPCSQ9HAB8 311 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 SPC25Q9HBM1 224 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 PLSCR2Q9NRY7 297 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TRNAU1APQ9NX07 287 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 LZTS1Q9Y250 596 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 NOX1Q9Y5S8 564 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 SIPA1L3O60292 1781 aaPredicted RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 MCF2LO15068 1137 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TLR2O60603 784 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 CNOT3O75175 753 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 ZBTB7AO95365 584 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TTLL1O95922 423 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 CDH3P22223 829 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 SLC5A2P31639 672 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 LONP1P36776 959 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 RRP1BQ14684 758 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 ACAP1Q15027 740 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TGFBIQ15582 683 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 MYLK3Q32MK0 819 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 RIN3Q8TB24 985 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TBCBQ99426 244 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 CCDC77Q9BR77 488 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 CRNKL1Q9BZJ0 848 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 ZDHHC7Q9NXF8 308 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 TAS2R1Q9NYW7 299 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 GRHL1Q9NZI5 618 aa8.34□□□□□ -1.07
VPS11-209ENST00000622309 RBMX2Q9Y388 322 aaKnown RBP8.34□□□□□ -1.07
VPS11-209ENST00000622309 KLRC4O43908 158 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 TFPTP0C1Z6 253 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 PIM1P11309 404 aaPredicted RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 ENTPD1P49961 510 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 FOXO4P98177 505 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 DLG1Q12959 904 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 TCIRG1Q13488 830 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 SNRNP48Q6IEG0 339 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 NET1Q7Z628 596 aaPredicted RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 ERI1Q8IV48 349 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 ICA1LQ8NDH6 482 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 ANKK1Q8NFD2 765 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 DDI1Q8WTU0 396 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 GPATCH1Q9BRR8 931 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 HGH1Q9BTY7 390 aa8.33□□□□□ -1.08
VPS11-209ENST00000622309 MRPS26Q9BYN8 205 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 PUS7LQ9H0K6 701 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 CDC42EP4Q9H3Q1 356 aaKnown RBP8.33□□□□□ -1.08
VPS11-209ENST00000622309 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms