RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LNX2Q8N448 690 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 PDPRQ8NCN5 879 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 SLC17A8Q8NDX2 589 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 TMEM125Q96AQ2 219 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 BBC3Q96PG8 261 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-229ENST00000621897 VKORC1Q9BQB6 163 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 IMPG2Q9BZV3 1241 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 R3HDMLQ9H3Y0 253 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 KCTD5Q9NXV2 234 aa5.8□□□□□ -1.48
BRCA1-229ENST00000621897 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 PRAMEF33A0A0G2JMD5 474 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 A0A1W2PS29 197 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 PRAMEF10O60809 474 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 PPFIA2O75334 1257 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 KCNA2P16389 499 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 SIM1P81133 766 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 ZNF169Q14929 603 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 SF3B3Q15393 1217 aaKnown RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 SP5Q6BEB4 398 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 SLC4A10Q6U841 1118 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 CFAP52Q8N1V2 620 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 ZCRB1Q8TBF4 217 aaKnown RBP5.79□□□□□ -1.48
BRCA1-229ENST00000621897 FOXJ2Q9P0K8 574 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 SPEF1Q9Y4P9 236 aa5.79□□□□□ -1.48
BRCA1-229ENST00000621897 PRSS29PA6NIE9 313 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 SUN1O94901 812 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 SNUPNO95149 360 aaKnown RBP5.78□□□□□ -1.48
BRCA1-229ENST00000621897 PDCP20941 246 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 GATA3P23771 443 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 CD300EQ496F6 205 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-229ENST00000621897 CCDC93Q567U6 631 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 TMEM240Q5SV17 173 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 ZNF362Q5T0B9 420 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-229ENST00000621897 ADGRG3Q86Y34 549 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 NTN5Q8WTR8 489 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-229ENST00000621897 C1orf43Q9BWL3 253 aa5.78□□□□□ -1.48
BRCA1-229ENST00000621897 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
BRCA1-229ENST00000621897 KAT6AQ92794 2004 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 ANKRD62A6NC57 917 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 RPLP2P05387 115 aaKnown RBP5.77□□□□□ -1.49
BRCA1-229ENST00000621897 ZNF844Q08AG5 666 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 STRIP1Q5VSL9 837 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 DPY19L2P1Q6NXN4 242 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 TMPRSS9Q7Z410 1059 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 CLNKQ7Z7G1 428 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 CATIPQ7Z7H3 387 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 ZBTB46Q86UZ6 589 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 PRR18Q8N4B5 295 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 CPA6Q8N4T0 437 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 FAM98AQ8NCA5 519 aaKnown RBP5.77□□□□□ -1.49
BRCA1-229ENST00000621897 SLC30A5Q8TAD4 765 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 ACTRT2Q8TDY3 377 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 FBXO41Q8TF61 875 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 BRINP2Q9C0B6 783 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 INTS13Q9NVM9 706 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-229ENST00000621897 LUC7L2Q9Y383 392 aaKnown RBP5.77□□□□□ -1.49
BRCA1-229ENST00000621897 PCDHA3Q9Y5H8 950 aa5.77□□□□□ -1.49
BRCA1-229ENST00000621897 CCDC195A0A1B0GUA6 201 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 LPOP22079 712 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-229ENST00000621897 PHKA1P46020 1223 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 RPS7P62081 194 aaKnown RBP5.76□□□□□ -1.49
BRCA1-229ENST00000621897 PSMC1P62191 440 aaKnown RBP5.76□□□□□ -1.49
BRCA1-229ENST00000621897 MRPS35P82673 323 aaKnown RBP5.76□□□□□ -1.49
BRCA1-229ENST00000621897 ERCC6LQ2NKX8 1250 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 TAPT1Q6NXT6 567 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 TSHZ1Q6ZSZ6 1077 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 USP45Q70EL2 814 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 ADGRG5Q8IZF4 528 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 C3orf20Q8ND61 904 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 LPIN2Q92539 896 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 SLC9A6Q92581 669 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 CHMP4CQ96CF2 233 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 MAN1C1Q9NR34 630 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 LRIT1Q9P2V4 623 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 TLK1Q9UKI8 766 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 DMTF1Q9Y222 760 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 NOP58Q9Y2X3 529 aaKnown RBP5.76□□□□□ -1.49
BRCA1-229ENST00000621897 INSL6Q9Y581 213 aa5.76□□□□□ -1.49
BRCA1-229ENST00000621897 ZNF785A8K8V0 405 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 TOR1BO14657 336 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 IL33O95760 270 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 GJB1P08034 283 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 POU2F2P09086 479 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 SRGNP10124 158 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 PRDX5P30044 214 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 RARRES1P49788 294 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 ANXA11P50995 505 aaKnown RBP5.75□□□□□ -1.49
BRCA1-229ENST00000621897 NEK2P51955 445 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 FPGSQ05932 587 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 NOGQ13253 232 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 DYRK1AQ13627 763 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 FBXO42Q6P3S6 717 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 VWA1Q6PCB0 445 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 FAM90A1Q86YD7 464 aa5.75□□□□□ -1.49
BRCA1-229ENST00000621897 RGMAQ96B86 450 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms