RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 ALG6Q9Y672 507 aa29.7■■■□□ 2.34
FMR1-219ENST00000621453 SCN10AQ9Y5Y9 1956 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 TARSL2A2RTX5 802 aaKnown RBP29.69■■■□□ 2.34
FMR1-219ENST00000621453 SEPT4O43236 478 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 TOMM70O94826 608 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 CFHP08603 1231 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 ATICP31939 592 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 CCDC70Q6NSX1 233 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 WDR93Q6P2C0 686 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 TMEM130Q8N3G9 435 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 ACTRT1Q8TDG2 376 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 TMEM40Q8WWA1 233 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 VRTNQ9H8Y1 702 aa29.69■■■□□ 2.34
FMR1-219ENST00000621453 MYBL1P10243 752 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 VSNL1P62760 191 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 NOMO3P69849 1222 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 WDR72Q3MJ13 1102 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 CC2D1AQ6P1N0 951 aaPredicted RBP29.68■■■□□ 2.34
FMR1-219ENST00000621453 PASD1Q8IV76 773 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 EIF2AQ9BY44 585 aaKnown RBP29.68■■■□□ 2.34
FMR1-219ENST00000621453 BCO2Q9BYV7 579 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 RBM12Q9NTZ6 932 aaKnown RBP29.68■■■□□ 2.34
FMR1-219ENST00000621453 SNTG2Q9NY99 539 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 DDX3YO15523 660 aaKnown RBP29.68■■■□□ 2.34
FMR1-219ENST00000621453 CEP104O60308 925 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 PGK1P00558 417 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 RARBP10826 455 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 TRIM32Q13049 653 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 ZNF394Q53GI3 561 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 PPP1R2P3Q6NXS1 205 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 USP38Q8NB14 1042 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 PLEKHA5Q9HAU0 1116 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 AVENQ9NQS1 362 aaPredicted RBP29.68■■■□□ 2.34
FMR1-219ENST00000621453 ITGA11Q9UKX5 1188 aa29.68■■■□□ 2.34
FMR1-219ENST00000621453 POLR2BP30876 1174 aaKnown RBP29.67■■■□□ 2.34
FMR1-219ENST00000621453 CRYBB1P53674 252 aaPredicted RBP29.67■■■□□ 2.34
FMR1-219ENST00000621453 RNASE9P60153 205 aaKnown RBP29.67■■■□□ 2.34
FMR1-219ENST00000621453 SP3Q02447 781 aa29.67■■■□□ 2.34
FMR1-219ENST00000621453 MESDQ14696 234 aa29.67■■■□□ 2.34
FMR1-219ENST00000621453 DEFB115Q30KQ5 88 aa29.67■■■□□ 2.34
FMR1-219ENST00000621453 REM2Q8IYK8 340 aaPredicted RBP29.67■■■□□ 2.34
FMR1-219ENST00000621453 KIF12Q96FN5 646 aa29.67■■■□□ 2.34
FMR1-219ENST00000621453 CAPNS2Q96L46 248 aa29.67■■■□□ 2.34
FMR1-219ENST00000621453 RRP9O43818 475 aaKnown RBP29.66■■■□□ 2.34
FMR1-219ENST00000621453 CAP1Q01518 475 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 CACNB2Q08289 660 aaPredicted RBP29.66■■■□□ 2.34
FMR1-219ENST00000621453 TAF2Q6P1X5 1199 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 MON1BQ7L1V2 547 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 RASGEF1CQ8N431 466 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 ARFGAP3Q9NP61 516 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 DPP3Q9NY33 737 aa29.66■■■□□ 2.34
FMR1-219ENST00000621453 TMEM110-MUSTN1A8MSY1 372 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 ZRANB2O95218 330 aaKnown RBP eCLIP29.65■■■□□ 2.34
FMR1-219ENST00000621453 SSTR3P32745 418 aaPredicted RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 NKX3-2P78367 333 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 CXCL17Q6UXB2 119 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 UBE2Q2Q8WVN8 375 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 HNRNPLLQ8WVV9 542 aaKnown RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 RPS6KC1Q96S38 1066 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 TRIM6Q9C030 488 aaPredicted RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 AGAP1Q9UPQ3 857 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 PIN4Q9Y237 131 aaKnown RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 MIF4GDA9UHW6 222 aaKnown RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 ERLIN1O75477 346 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 SEC31AO94979 1220 aaKnown RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 MCM3P25205 808 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 YARSP54577 528 aaKnown RBP29.65■■■□□ 2.34
FMR1-219ENST00000621453 VCPIP1Q96JH7 1222 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 SNX27Q96L92 541 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 GTF2IRD1Q9UHL9 959 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 DERAQ9Y315 318 aa29.65■■■□□ 2.34
FMR1-219ENST00000621453 PGRMC1O00264 195 aaKnown RBP29.64■■■□□ 2.34
FMR1-219ENST00000621453 RRM1P23921 792 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 BRD2P25440 801 aaKnown RBP29.64■■■□□ 2.34
FMR1-219ENST00000621453 RAP1GAPP47736 663 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 GUCY2FP51841 1108 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 RBP5P82980 135 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 NBPF20Q3BBV1 942 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 PHF13Q86YI8 300 aaPredicted RBP29.64■■■□□ 2.34
FMR1-219ENST00000621453 HPDLQ96IR7 371 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 BTBD6Q96KE9 485 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.64■■■□□ 2.341e-7■■□□□ 11.9
FMR1-219ENST00000621453 LRRC1Q9BTT6 524 aa29.64■■■□□ 2.34
FMR1-219ENST00000621453 P4HA1P13674 534 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 COMTP21964 271 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 CARD9Q9H257 536 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 ADAM22Q9P0K1 906 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 TMEM59LQ9UK28 342 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 NOC2LQ9Y3T9 749 aaKnown RBP29.63■■■□□ 2.33
FMR1-219ENST00000621453 CENPFP49454 3210 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 STAU1O95793 577 aaKnown RBP29.63■■■□□ 2.33
FMR1-219ENST00000621453 C11orf70Q9BRQ4 267 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 SDCBP2Q9H190 292 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 HES2Q9Y543 173 aa29.63■■■□□ 2.33
FMR1-219ENST00000621453 ADAMTS4O75173 837 aa29.62■■■□□ 2.33
FMR1-219ENST00000621453 CDH8P55286 799 aa29.62■■■□□ 2.33
FMR1-219ENST00000621453 LIN9Q5TKA1 542 aa29.62■■■□□ 2.33
FMR1-219ENST00000621453 DCAF12L1Q5VU92 463 aa29.62■■■□□ 2.33
FMR1-219ENST00000621453 UBL4BQ8N7F7 174 aa29.62■■■□□ 2.33
FMR1-219ENST00000621453 ZSWIM1Q9BR11 485 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms