RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 M0QZQ0 153 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 SYN3O14994 580 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 LILRB3O75022 631 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 TRIM49P0CI25 452 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 TRIM49CP0CI26 452 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 AARSP49588 968 aaKnown RBP eCLIP20.02■□□□□ 0.8
CIRBP-245ENST00000621399 TRPC3Q13507 836 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 SKIV2LQ15477 1246 aaKnown RBP20.02■□□□□ 0.8
CIRBP-245ENST00000621399 STX1AQ16623 288 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 TPD52L1Q16890 204 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-245ENST00000621399 CCDC40Q4G0X9 1142 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 C1orf220Q5T0J3 134 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 PDXDC1Q6P996 788 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 GPR65Q8IYL9 337 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 APPL2Q8NEU8 664 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 SENP8Q96LD8 212 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 MED15Q96RN5 788 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 METTL14Q9HCE5 456 aaKnown RBP20.02■□□□□ 0.8
CIRBP-245ENST00000621399 PCDHB8Q9UN66 801 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 ANK1P16157 1881 aa20.02■□□□□ 0.8
CIRBP-245ENST00000621399 PDCD11Q14690 1871 aaKnown RBP20.02■□□□□ 0.8
CIRBP-245ENST00000621399 PRRC2BQ5JSZ5 2229 aaKnown RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 STX10O60499 249 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 LETM1O95202 739 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 GNA14O95837 355 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 CST3P01034 146 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 C4BPAP04003 597 aaKnown RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 GCLMP48507 274 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 CREMQ03060 361 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 HYAL1Q12794 435 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 MYO1EQ12965 1108 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 DCAF17Q5H9S7 520 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 TCERG1LQ5VWI1 586 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 TDRD10Q5VZ19 366 aaKnown RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 PRSS55Q6UWB4 352 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 FRMD5Q7Z6J6 570 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 LNX1Q8TBB1 728 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 PIK3R5Q8WYR1 880 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 HPDLQ96IR7 371 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 CDCA3Q99618 268 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 MMRN2Q9H8L6 949 aa20.01■□□□□ 0.79
CIRBP-245ENST00000621399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.01■□□□□ 0.79
CIRBP-245ENST00000621399 ARHGEF37A1IGU5 675 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 CYB561D2O14569 222 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 CNPP09543 421 aaKnown RBP20■□□□□ 0.79
CIRBP-245ENST00000621399 ODC1P11926 461 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 KLRC2P26717 231 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
CIRBP-245ENST00000621399 MCCD1P59942 119 aaPredicted RBP20■□□□□ 0.79
CIRBP-245ENST00000621399 TYRO3Q06418 890 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 PPP3CAQ08209 521 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 PSMD5Q16401 504 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 DUSP6Q16828 381 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 ZACNQ401N2 412 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 VARS2Q5ST30 1063 aaKnown RBP20■□□□□ 0.79
CIRBP-245ENST00000621399 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 SV2AQ7L0J3 742 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 KLHL5Q96PQ7 755 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 RXFP1Q9HBX9 757 aa20■□□□□ 0.79
CIRBP-245ENST00000621399 TIMM13Q9Y5L4 95 aaPredicted RBP20■□□□□ 0.79
CIRBP-245ENST00000621399 TEX28O15482 410 aa19.99■□□□□ 0.79
CIRBP-245ENST00000621399 NCK2O43639 380 aa19.99■□□□□ 0.79
CIRBP-245ENST00000621399 CLASP2O75122 1294 aaKnown RBP19.99■□□□□ 0.79
CIRBP-245ENST00000621399 RPL17P18621 184 aaKnown RBP19.99■□□□□ 0.79
CIRBP-245ENST00000621399 GTF2H1P32780 548 aa19.99■□□□□ 0.79
CIRBP-245ENST00000621399 NCOA4Q13772 614 aa19.99■□□□□ 0.79
CIRBP-245ENST00000621399 FNIP2Q9P278 1114 aa19.99■□□□□ 0.79
CIRBP-245ENST00000621399 H7C4K7 107 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 CLSTN1O94985 981 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 ADH1AP07327 375 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 CCDC192P0DO97 292 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 TYMPP19971 482 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 NDUFV1P49821 464 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 MYL6P60660 151 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 YWHAHQ04917 246 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-245ENST00000621399 C15orf39Q6ZRI6 1047 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 EP400NLQ6ZTU2 488 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 CREBRFQ8IUR6 639 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 EFHBQ8N7U6 833 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 TMEM8AQ9HCN3 771 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 MTRRQ9UBK8 725 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 DSEQ9UL01 958 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 SNX9Q9Y5X1 595 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 BACE2Q9Y5Z0 518 aa19.98■□□□□ 0.79
CIRBP-245ENST00000621399 MYO7AQ13402 2215 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 SYCE3A1L190 88 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 FSD2A1L4K1 749 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 HUS1O60921 280 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 VNN1O95497 513 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 ATICP31939 592 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 MRPL58Q14197 206 aaKnown RBP19.97■□□□□ 0.79
CIRBP-245ENST00000621399 CTXN3Q4LDR2 81 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 KRT39Q6A163 491 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 LLGL2Q6P1M3 1020 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 C11orf57Q6ZUT1 292 aaPredicted RBP19.97■□□□□ 0.79
CIRBP-245ENST00000621399 PPFIBP1Q86W92 1011 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 METTL23Q86XA0 190 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 GLYCTKQ8IVS8 523 aa19.97■□□□□ 0.79
CIRBP-245ENST00000621399 CLSTN3Q9BQT9 956 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms