RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 COL6A3P12111 3177 aa8.53□□□□□ -1.04
CBWD1-228ENST00000619157 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.04
CBWD1-228ENST00000619157 A0A1W2PPC1 479 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 HAS3O00219 553 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 PRPF3O43395 683 aaKnown RBP8.52□□□□□ -1.05
CBWD1-228ENST00000619157 LARGE1O95461 756 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 ZNF286BP0CG31 522 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 SCG2P13521 617 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 IFNAR1P17181 557 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CTSKP43235 329 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CPT1AP50416 773 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 NAPAP54920 295 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CBX2Q14781 532 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-228ENST00000619157 SHHQ15465 462 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CELF3Q5SZQ8 465 aaKnown RBP8.52□□□□□ -1.05
CBWD1-228ENST00000619157 UBXN11Q5T124 520 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 TDHQ8IZJ6 230 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CYP2W1Q8TAV3 490 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 AIFM3Q96NN9 605 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 MPHOSPH6Q99547 160 aaKnown RBP8.52□□□□□ -1.05
CBWD1-228ENST00000619157 GPR20Q99678 358 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 MTG1Q9BT17 334 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-228ENST00000619157 BRMS1Q9HCU9 246 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 PDRG1Q9NUG6 133 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 GMIPQ9P107 970 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 ACSL6Q9UKU0 697 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 TPCN1Q9ULQ1 816 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 PCDHA6Q9UN73 950 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 PCDHA8Q9Y5H6 950 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 HCFC2Q9Y5Z7 792 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 UBIAD1Q9Y5Z9 338 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 CYP46A1Q9Y6A2 500 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 EYSQ5T1H1 3165 aa8.52□□□□□ -1.05
CBWD1-228ENST00000619157 SMCO2A6NFE2 343 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 B4DLN1 442 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 K7ESM1 405 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ZEB2O60315 1214 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 CLEC3AO75596 197 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ZNF205O95201 554 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 CTDNEP1O95476 244 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 F2P00734 622 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 TIMP1P01033 207 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 MSL3P1P0C860 447 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 CYP2C9P11712 490 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 KCNA2P16389 499 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 GARTP22102 1010 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 CYP2C18P33260 490 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
CBWD1-228ENST00000619157 AK2P54819 239 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ANAPC15P60006 121 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 SCRN1Q12765 414 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 STK3Q13188 491 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 NPY5RQ15761 445 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 LRIT3Q3SXY7 679 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ZC3H14Q6PJT7 736 aaKnown RBP8.51□□□□□ -1.05
CBWD1-228ENST00000619157 DHX37Q8IY37 1157 aaKnown RBP8.51□□□□□ -1.05
CBWD1-228ENST00000619157 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 RASGRP4Q8TDF6 673 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 CUL5Q93034 780 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ZNF274Q96GC6 653 aaPredicted RBP8.51□□□□□ -1.05
CBWD1-228ENST00000619157 SPATA25Q9BR10 227 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 C16orf70Q9BSU1 422 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 RNF26Q9BY78 433 aaPredicted RBP8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ANO3Q9BYT9 981 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ZMYND12Q9H0C1 365 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 VPS54Q9P1Q0 977 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 DOCK5Q9H7D0 1870 aa8.51□□□□□ -1.05
CBWD1-228ENST00000619157 ESYT2A0FGR8 921 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 hCG_1984214I3L0E3 225 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 FIBPO43427 364 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
CBWD1-228ENST00000619157 ARP10275 920 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 TGFB3P10600 412 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 CSF2RAP15509 400 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 PFKLP17858 780 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 SREBF1P36956 1147 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 ADCY7P51828 1080 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 GPNMBQ14956 572 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 NT5DC1Q5TFE4 455 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 JAKMIP3Q5VZ66 844 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 MFSD5Q6N075 450 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 XRRA1Q6P2D8 792 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 ZNF713Q8N859 430 aaPredicted RBP8.5□□□□□ -1.05
CBWD1-228ENST00000619157 SPATA33Q96N06 139 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.5□□□□□ -1.05
CBWD1-228ENST00000619157 SLC26A6Q9BXS9 759 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
CBWD1-228ENST00000619157 GJB4Q9NTQ9 266 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 HDAC6Q9UBN7 1215 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 CHD7Q9P2D1 2997 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 MROH7Q68CQ1 1323 aa8.5□□□□□ -1.05
CBWD1-228ENST00000619157 IGLV3-22A0A075B6J6 115 aa8.49□□□□□ -1.05
CBWD1-228ENST00000619157 CCDC196A0A1B0GTZ2 297 aa8.49□□□□□ -1.05
CBWD1-228ENST00000619157 GSTTP1A0A1W2PQM5 241 aa8.49□□□□□ -1.05
CBWD1-228ENST00000619157 FAM86B1E9PN63 330 aa8.49□□□□□ -1.05
CBWD1-228ENST00000619157 PFKFB2O60825 505 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms