RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ITIH5Q86UX2 942 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 KSR1Q8IVT5 923 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SLFN12Q8IYM2 578 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 EFCAB3Q8N7B9 438 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 APPL2Q8NEU8 664 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 BAHD1Q8TBE0 780 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 PIBF1Q8WXW3 757 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ING5Q8WYH8 240 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 PSMG2Q969U7 264 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CEP170P1Q96L14 293 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TBC1D32Q96NH3 1257 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 FAM83CQ9BQN1 747 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 ZDHHC5Q9C0B5 715 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 LNPKQ9C0E8 428 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 KLK13Q9UKR3 277 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 NFE2L3Q9Y4A8 694 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 V9GY48 417 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 A0A0A0MRY4 1105 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TULP1O00294 542 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 GJB3O75712 270 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SEC24AO95486 1093 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 IFNAR1P17181 557 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TYMPP19971 482 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CYP3A5P20815 502 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 GLRA2P23416 452 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TKTP29401 623 aaKnown RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 CDC25CP30307 473 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 EIF2DP41214 584 aaKnown RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 NAMPTP43490 491 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 FGD1P98174 961 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 USP4Q13107 963 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 LPAL2Q16609 132 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CREB3L3Q68CJ9 461 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 PADI6Q6TGC4 694 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 MCPH1Q8NEM0 835 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 BPIFB1Q8TDL5 484 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ASAP3Q8TDY4 903 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TCEAL4Q96EI5 215 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CHFRQ96EP1 664 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 B3GALT6Q96L58 329 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ZSWIM3Q96MP5 696 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 P2RY13Q9BPV8 354 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 TASP1Q9H6P5 420 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CAPN10Q9HC96 672 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CEP72Q9P209 647 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 BRPF3Q9ULD4 1205 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 YIPF1Q9Y548 306 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 ANAPC1Q9H1A4 1944 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 MAP1BP46821 2468 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 ACKR2O00590 384 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 GIPC1O14908 333 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 MAP3K13O43283 966 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 CSDE1O75534 798 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 PPP1R37O75864 691 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 ADRB2P07550 413 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PLA2G2AP14555 144 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 LRPAP1P30533 357 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 EFNA5P52803 228 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 MRPS21P82921 87 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 ORC2Q13416 577 aaPredicted RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 NTRK3Q16288 839 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 USP39Q53GS9 565 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 RNF20Q5VTR2 975 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PLA2G4FQ68DD2 849 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TXNDC11Q6PKC3 985 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 SYT12Q8IV01 421 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 ZBTB8OSQ8IWT0 167 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 FAM200AQ8TCP9 573 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 CPB2Q96IY4 423 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 CORO1BQ9BR76 489 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 NUSAP1Q9BXS6 441 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 PRORYQ9H606 182 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 FBXL5Q9UKA1 691 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TRIP11Q15643 1979 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 STK36Q9NRP7 1315 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PRRG1O14668 218 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 MEFVO15553 781 aaPredicted RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 PAPSS1O43252 624 aaPredicted RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 MARCH6O60337 910 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 RECQL4O94761 1208 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 VNN2O95498 520 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 SERPINF2P08697 491 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PROZP22891 400 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 P2RY2P41231 377 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PON2Q15165 354 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 PPP2R5AQ15172 486 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TEAD2Q15562 447 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 DUOXA1Q1HG43 343 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 SLC36A4Q6YBV0 504 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 MICU3Q86XE3 530 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 CMTR1Q8N1G2 835 aaKnown RBP5.04□□□□□ -1.6
SNCA-213ENST00000618500 CPA6Q8N4T0 437 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 TMEM143Q96AN5 459 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 LXNQ9BS40 222 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 BCL11AQ9H165 835 aa5.04□□□□□ -1.6
SNCA-213ENST00000618500 DNAJC25Q9H1X3 360 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms