RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LOC285556D6RIA3 1793 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 GOLGA8KD6RF30 607 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 GPR25O00155 361 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 KIAA0391O15091 583 aaKnown RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 HBP1O60381 514 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 PHF2O75151 1096 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 LGR5O75473 907 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 TCF4P15884 667 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 WDR72Q3MJ13 1102 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 KAZNQ674X7 775 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 EGFL6Q8IUX8 553 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 SH3GL2Q99962 352 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 CHST7Q9NS84 486 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 ANKRD65E5RJM6 399 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 ASS1P00966 412 aaKnown RBP13.21□□□□□ -0.3
CIITA-212ENST00000618207 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.3
CIITA-212ENST00000618207 TAS2R40P59535 323 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 CENPCQ03188 943 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 PPP1R7Q15435 360 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 SGO2Q562F6 1265 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 MPZL3Q6UWV2 235 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 WDR49Q8IV35 697 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 CDT1Q9H211 546 aa13.21□□□□□ -0.3
CIITA-212ENST00000618207 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.3
CIITA-212ENST00000618207 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 MTA2O94776 668 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 CYP1A1P04798 512 aaPredicted RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 NFICP08651 508 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 HOXC6P09630 235 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 TBXAS1P24557 533 aaPredicted RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 CDR1P51861 262 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 GNGT1P63211 74 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 ARHGAP1Q07960 439 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 LRRC31Q6UY01 552 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 LRRC45Q96CN5 670 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 MTUS1Q9ULD2 1270 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 IGKV6-21A0A0C4DH24 114 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 ASB14A6NK59 587 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 GOLGA8SH3BPF8 625 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 PIK3R2O00459 728 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 ACKR2O00590 384 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 ABLIM1O14639 778 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 MCCD1P59942 119 aaPredicted RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 MCL1Q07820 350 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 IFFO1Q0D2I5 559 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 MAMLD1Q13495 774 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 DUPD1Q68J44 220 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 TFAP2BQ92481 460 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 CAPS2Q9BXY5 557 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 RPF1Q9H9Y2 349 aaKnown RBP13.2□□□□□ -0.3
CIITA-212ENST00000618207 RSPH14Q9UHP6 348 aa13.2□□□□□ -0.3
CIITA-212ENST00000618207 CHRNA3P32297 505 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 GUCY1A3Q02108 690 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 MBTD1Q05BQ5 628 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 TFDP1Q14186 410 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 ODF2Q5BJF6 829 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 MCEEQ96PE7 176 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
CIITA-212ENST00000618207 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 R3HDM2Q9Y2K5 976 aaKnown RBP13.19□□□□□ -0.3
CIITA-212ENST00000618207 TULP2O00295 520 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 C22orf31O95567 290 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 TNNC2P02585 160 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 ITGB3P05106 788 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 RALAP11233 206 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
CIITA-212ENST00000618207 PTGIRP43119 386 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
CIITA-212ENST00000618207 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.19□□□□□ -0.3
CIITA-212ENST00000618207 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 SHBGP04278 402 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 KRT10P13645 584 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 PSMC4P43686 418 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms