RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 HP1BP3Q5SSJ5 553 aaPredicted RBP10.77□□□□□ -0.69
CUL4A-212ENST00000617546 ZNF746Q6NUN9 644 aaPredicted RBP10.77□□□□□ -0.69
CUL4A-212ENST00000617546 MOXD1Q6UVY6 613 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 B3GNT6Q6ZMB0 384 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 LRRC6Q86X45 466 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 ANKMY2Q8IV38 441 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 PPP1R14BQ96C90 147 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 TSPAN17Q96FV3 270 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
CUL4A-212ENST00000617546 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 CHD1O14646 1710 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 SNX3O60493 162 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ACAD10Q6JQN1 1059 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 MAGED4Q96JG8 741 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 LRRC4Q9HBW1 653 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ZBTB1Q9Y2K1 713 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 FIS1Q9Y3D6 152 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 MYO3BQ8WXR4 1341 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 M0R3G1 203 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 AKAP10O43572 662 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 SERPINI2O75830 405 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 UNC5CO95185 931 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 SLC9A1P19634 815 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 TOB1P50616 345 aaPredicted RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ILF2Q12905 390 aaKnown RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 PRPF18Q99633 342 aaKnown RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 TMEM260Q9NX78 707 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 AMPD2Q01433 879 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ZNF699Q32M78 642 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 CCDC90BQ9GZT6 254 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 TMEM8AQ9HCN3 771 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.696e-6■■■■□ 20.9
CUL4A-212ENST00000617546 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 CD58P19256 250 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 GCLCP48506 637 aaPredicted RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 ITGA9Q13797 1035 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 GORASP1Q9BQQ3 440 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 TUBA8Q9NY65 449 aaPredicted RBP10.76□□□□□ -0.69
CUL4A-212ENST00000617546 C2CD2Q9Y426 696 aa10.76□□□□□ -0.69
CUL4A-212ENST00000617546 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 MYL2P10916 166 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 DRD4P21917 467 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PON1P27169 355 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 GTF2H1P32780 548 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PEX5P50542 639 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PSMC5P62195 406 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 LBRQ14739 615 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 CHI3L2Q15782 390 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 NET1Q7Z628 596 aaPredicted RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM63Q969Q1 353 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SCN3BQ9NY72 215 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 UTP6Q9NYH9 597 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PRKAA2P54646 552 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 RASA2Q15283 850 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 KIAA0825Q8IV33 1275 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TSEN2Q8NCE0 465 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 FBXO25Q8TCJ0 367 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 AGAP11Q8TF27 550 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 NCLNQ969V3 563 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TEX12Q9BXU0 123 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 EFCAB1Q9HAE3 211 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 ABCF3Q9NUQ8 709 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 NXF1Q9UBU9 619 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 DUSP10Q9Y6W6 482 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 THNSL1Q8IYQ7 743 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 FAM149B1Q96BN6 582 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 MPP4Q96JB8 637 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TMEM120AQ9BXJ8 343 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 NGRNQ9NPE2 291 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 ATXN10Q9UBB4 475 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 STAP1Q9ULZ2 295 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SUPT3HO75486 399 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TSHRP16473 764 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 RPA1P27694 616 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TPP2P29144 1249 aaPredicted RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 ADARP55265 1226 aaKnown RBP10.75□□□□□ -0.69
CUL4A-212ENST00000617546 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM62Q9BVG3 475 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 ATAD3AQ9NVI7 634 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 HSPBP1Q9NZL4 362 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 KIF17Q9P2E2 1029 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 TMCO1Q9UM00 188 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 LOC102724428A0A0B4J2F2 783 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 PSMG1O95456 288 aa10.75□□□□□ -0.69
CUL4A-212ENST00000617546 SIK1P57059 783 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms