RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CCSAPQ6IQ19 270 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ZMAT2Q96NC0 199 aaKnown RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 RNF19AQ9NV58 838 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 BUB1BO60566 1050 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 MYCNP04198 464 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 VEGFBP49765 207 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CLEC16AQ2KHT3 1053 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 REM2Q8IYK8 340 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 KLHDC9Q8NEP7 349 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ZSWIM1Q9BR11 485 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NXF3Q9H4D5 531 aaKnown RBP22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CISHQ9NSE2 258 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 HYOU1Q9Y4L1 999 aa22.05■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ASGR1P07306 291 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 GNAT1P11488 350 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 UNGP13051 313 aaPredicted RBP22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 KCNA10Q16322 511 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 DCAF4L1Q3SXM0 396 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NOTUMQ6P988 496 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NXF1Q9UBU9 619 aaKnown RBP22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 RALGAPA2Q2PPJ7 1873 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 RAP1GAPP47736 663 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CRYBB1P53674 252 aaPredicted RBP22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 TMEM132DQ14C87 1099 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 KYAT1Q16773 422 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 MAP3K21Q5TCX8 1036 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 MS4A14Q96JA4 679 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 PIN4Q9Y237 131 aaKnown RBP22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 STXBP5LQ9Y2K9 1186 aa22.04■■□□□ 1.12
CNTNAP3B-212ENST00000617422 GNA15P30679 374 aa22.03■■□□□ 1.12
CNTNAP3B-212ENST00000617422 HNRNPH2P55795 449 aaKnown RBP22.03■■□□□ 1.12
CNTNAP3B-212ENST00000617422 UBXN11Q5T124 520 aa22.03■■□□□ 1.12
CNTNAP3B-212ENST00000617422 SDCBP2Q9H190 292 aa22.03■■□□□ 1.12
CNTNAP3B-212ENST00000617422 SPC25Q9HBM1 224 aa22.03■■□□□ 1.12
CNTNAP3B-212ENST00000617422 GPC5P78333 572 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ZNF394Q53GI3 561 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ACAD10Q6JQN1 1059 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NME8Q8N427 588 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CPA5Q8WXQ8 436 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CYFIP2Q96F07 1278 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ABCB6Q9NP58 842 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CYP1A1P04798 512 aaPredicted RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 TCP1P17987 556 aaKnown RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 POLR2BP30876 1174 aaKnown RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CDH8P55286 799 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 IFI16Q16666 785 aaKnown RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 WDR72Q3MJ13 1102 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 C2CD6Q53TS8 623 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 TAF2Q6P1X5 1199 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 DAAM2Q86T65 1068 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NT5DC3Q86UY8 548 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 PASD1Q8IV76 773 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 ZNF784Q8NCA9 323 aaPredicted RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 SNX27Q96L92 541 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 PNKPQ96T60 521 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 CELF4Q9BZC1 486 aaKnown RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 OSBPL7Q9BZF2 842 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 RNF39Q9H2S5 420 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 L1RE1Q9UN81 338 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 NOC2LQ9Y3T9 749 aaKnown RBP22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 C2CD2Q9Y426 696 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 SCN1AP35498 2009 aa22.02■■□□□ 1.12
CNTNAP3B-212ENST00000617422 AKAP5P24588 427 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 BPIFB4P59827 614 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PCBP1Q15365 356 aaKnown RBP eCLIP22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 FAM47CQ5HY64 1035 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 LLGL2Q6P1M3 1020 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 FAM228AQ86W67 206 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF677Q86XU0 584 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 KIF12Q96FN5 646 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 BCO2Q9BYV7 579 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SMYD3Q9H7B4 428 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 DPP3Q9NY33 737 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 KIF4AO95239 1232 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TCEAL1Q15170 157 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 NAA35Q5VZE5 725 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ALKAL1Q6UXT8 129 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF606Q8WXB4 792 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 APOL6Q9BWW8 343 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CDY2AQ9Y6F7 541 aa22.01■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PPEF2O14830 753 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RECQL4O94761 1208 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HMGCRP04035 888 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MRPS6P82932 125 aaKnown RBP22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 GLRA4Q5JXX5 417 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SERINC5Q86VE9 423 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TFAP2BQ92481 460 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CTTNBP2NLQ9P2B4 639 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TSKSQ9UJT2 592 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ADAM21Q9UKJ8 722 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 AGAP1Q9UPQ3 857 aa22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PDCD11Q14690 1871 aaKnown RBP22■■□□□ 1.11
CNTNAP3B-212ENST00000617422 H3BQF6 201 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 THAP12O43422 761 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CHRNA1P02708 482 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CYP1A2P05177 515 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CTSHP09668 335 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HADHBP55084 474 aaKnown RBP21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF667Q5HYK9 610 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CPNE8Q86YQ8 564 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms