RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KIAA1522Q9P206 1035 aaPredicted RBP8.34□□□□□ -1.08
NEK3-207ENST00000617054 TSKSQ9UJT2 592 aa8.34□□□□□ -1.08
NEK3-207ENST00000617054 PIN4Q9Y237 131 aaKnown RBP8.34□□□□□ -1.08
NEK3-207ENST00000617054 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 ZSCAN5CA6NGD5 496 aaPredicted RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 KIF4AO95239 1232 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 AKR1A1P14550 325 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 RRM1P23921 792 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 IGFBP6P24592 240 aaPredicted RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 POLR2BP30876 1174 aaKnown RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 FCGRTP55899 365 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 SESTD1Q86VW0 696 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 TXLNBQ8N3L3 684 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 MSL3Q8N5Y2 521 aaKnown RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 SOCS4Q8WXH5 440 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 TFAP2BQ92481 460 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 KRT35Q92764 455 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 ACAP3Q96P50 834 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 C11orf70Q9BRQ4 267 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 SDCBP2Q9H190 292 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 SMYD3Q9H7B4 428 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 AGAP1Q9UPQ3 857 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 ALG6Q9Y672 507 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 MEIS3P2A8K0S8 358 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 PIK3R2O00459 728 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 TNNC2P02585 160 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 ASPAP45381 313 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 TRADDQ15628 312 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 SGSM1Q2NKQ1 1148 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 KLHL7Q8IXQ5 586 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 ZNF606Q8WXB4 792 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 KCNN1Q92952 543 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 KIF12Q96FN5 646 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 TWNKQ96RR1 684 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 LPIN3Q9BQK8 851 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 TRIM6Q9C030 488 aaPredicted RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 GOLGA2P5Q9HBQ8 144 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 DMGDHQ9UI17 866 aaKnown RBP8.33□□□□□ -1.08
NEK3-207ENST00000617054 NR2E1Q9Y466 385 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 PCDHB2Q9Y5E7 798 aa8.33□□□□□ -1.08
NEK3-207ENST00000617054 COL1A2P08123 1366 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 C17orf102A2RUQ5 167 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 RRN3P2A6NIE6 340 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 HCRTO43612 131 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 B4GALT4O60513 344 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 MYBL2P10244 700 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ITGA4P13612 1032 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 TCP1P17987 556 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 EIF4BP23588 611 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 ADAM17P78536 824 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 CBX1P83916 185 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 CLEC16AQ2KHT3 1053 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 DCAF12L1Q5VU92 463 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 CD99L2Q8TCZ2 262 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ALG3Q92685 438 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 BEGAINQ9BUH8 593 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 GCOM2Q9BZD3 368 aaPredicted RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 CNOT8Q9UFF9 292 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 TUBGCP4Q9UGJ1 667 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ZC3H11AO75152 810 aaKnown RBP eCLIP8.32□□□□□ -1.085e-6■■□□□ 12.3
NEK3-207ENST00000617054 UNGP13051 313 aaPredicted RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 CYBAP13498 195 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 PRKAR2AP13861 404 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 CD19P15391 556 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 COMTP21964 271 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 SNX17Q15036 470 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 FAM187BQ17R55 369 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 MMS22LQ6ZRQ5 1243 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 TAF4BQ92750 862 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ADPGKQ9BRR6 497 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ABCB6Q9NP58 842 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ZCCHC17Q9NP64 241 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 AMFRQ9UKV5 643 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 MBLAC1A4D2B0 266 aaPredicted RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 HAS3O00219 553 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 O00370 1275 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 SASH3O75995 380 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 IGHA2P01877 340 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ASGR1P07306 291 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 MCF2P10911 925 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 SCP2P22307 547 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 PAFAH1B1P43034 410 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 SP3Q02447 781 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 TMEM132DQ14C87 1099 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 KCNA10Q16322 511 aa8.32□□□□□ -1.08
NEK3-207ENST00000617054 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
NEK3-207ENST00000617054 KRT12Q99456 494 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms