RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 PDCL3Q9H2J4 239 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 SPC25Q9HBM1 224 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 ARGLU1Q9NWB6 273 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 NXF1Q9UBU9 619 aaKnown RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 AMFRQ9UKV5 643 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 C2CD2Q9Y426 696 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 DNAH12Q6ZR08 3092 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CYP1A1P04798 512 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CFHP08603 1231 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 ELNP15502 786 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CCND3P30281 292 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 POLR2BP30876 1174 aaKnown RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CENPCQ03188 943 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CFAP221Q4G0U5 840 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 ZNF667Q5HYK9 610 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 ZNF564Q8TBZ8 553 aaPredicted RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CPA5Q8WXQ8 436 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 CYFIP2Q96F07 1278 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 KIF12Q96FN5 646 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 PNKPQ96T60 521 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 NUP85Q9BW27 656 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 ABCB6Q9NP58 842 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 RNF186Q9NXI6 227 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 PIN4Q9Y237 131 aaKnown RBP10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 HTTP42858 3142 aa10.7□□□□□ -0.7
AL353770.3-201ENST00000616253 TMEM110-MUSTN1A8MSY1 372 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 CES2O00748 559 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 MTA2O94776 668 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 AXLP30530 894 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 NSFP46459 744 aaKnown RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 RAP1GAPP47736 663 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 CRYBB1P53674 252 aaPredicted RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 YWHAEP62258 255 aaKnown RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 NOMO3P69849 1222 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 ITIH3Q06033 890 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 WDR72Q3MJ13 1102 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 ZNF394Q53GI3 561 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 TRIM72Q6ZMU5 477 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 CD302Q8IX05 232 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 NME8Q8N427 588 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 SPATA4Q8NEY3 305 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 HES6Q96HZ4 224 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 CALR3Q96L12 384 aaKnown RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 SNX27Q96L92 541 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 BCO2Q9BYV7 579 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 TRIM6Q9C030 488 aaPredicted RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 NXF3Q9H4D5 531 aaKnown RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 XPNPEP3Q9NQH7 507 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 RNF14Q9UBS8 474 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 CNOT8Q9UFF9 292 aaKnown RBP10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 GTF2IRD1Q9UHL9 959 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 ITGA11Q9UKX5 1188 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 HES2Q9Y543 173 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 SCN1AP35498 2009 aa10.69□□□□□ -0.7
AL353770.3-201ENST00000616253 ADAMTS4O75173 837 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 BRD2P25440 801 aaKnown RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 ATICP31939 592 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 GDF6Q6KF10 455 aaPredicted RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 NT5DC4Q86YG4 428 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MCOLN2Q8IZK6 566 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 ZNF606Q8WXB4 792 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 TRIM11Q96F44 468 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 PBKQ96KB5 322 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 CXCL16Q9H2A7 254 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 SMYD3Q9H7B4 428 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 PLEKHA5Q9HAU0 1116 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 DPP3Q9NY33 737 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 AGAP1Q9UPQ3 857 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 CEP104O60308 925 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 TRPA1O75762 1119 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 RECQL4O94761 1208 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MYBL1P10243 752 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 YARSP54577 528 aaKnown RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 RNASE9P60153 205 aaKnown RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 NKX3-2P78367 333 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MRPS6P82932 125 aaKnown RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MESDQ14696 234 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 FAM47CQ5HY64 1035 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MON1BQ7L1V2 547 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 MMGT1Q8N4V1 131 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 CD99L2Q8TCZ2 262 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 HPDLQ96IR7 371 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 BTBD6Q96KE9 485 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 C11orf70Q9BRQ4 267 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 APOL6Q9BWW8 343 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 SDCBP2Q9H190 292 aa10.68□□□□□ -0.7
AL353770.3-201ENST00000616253 VRTNQ9H8Y1 702 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms