RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 DNASE1L2Q92874 299 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 TCEAL4Q96EI5 215 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 USP28Q96RU2 1077 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 FOXD4L1Q9NU39 408 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 SPATA6Q9NWH7 488 aaPredicted RBP20.62■□□□□ 0.89
CDX1-202ENST00000616154 M0QZQ0 153 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 FRYLO94915 3013 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 CYP3A5P20815 502 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 CCR2P41597 374 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 MATR3P43243 847 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDX1-202ENST00000616154 CACNB1Q02641 598 aaPredicted RBP20.61■□□□□ 0.89
CDX1-202ENST00000616154 ZBTB6Q15916 424 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 CYP4A22Q5TCH4 519 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 TPRG1Q6ZUI0 275 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 HAUS6Q7Z4H7 955 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 CLDN23Q96B33 292 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 BICD1Q96G01 975 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 NELL2Q99435 816 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 FBXO4Q9UKT5 387 aa20.61■□□□□ 0.89
CDX1-202ENST00000616154 LAMTOR5O43504 91 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 OAZ2O95190 189 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 CPB1P15086 417 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 CD72P21854 359 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 TARSP26639 723 aaKnown RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 MARCKSP29966 332 aaPredicted RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 ID4P47928 161 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
CDX1-202ENST00000616154 EPHA5P54756 1037 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 PPP2R3AQ06190 1150 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 SPAG1Q07617 926 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 KYAT1Q16773 422 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 FAM78AQ5JUQ0 283 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 ZBTB41Q5SVQ8 909 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 IQCEQ6IPM2 695 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 USP49Q70CQ1 688 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 LEMD2Q8NC56 503 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 BEST2Q8NFU1 509 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 LARP4BQ92615 738 aaKnown RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 KIF12Q96FN5 646 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 EPSTI1Q96J88 318 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 ZNF512Q96ME7 567 aaPredicted RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 ASB16Q96NS5 453 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 REEP2Q9BRK0 252 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 OXCT2Q9BYC2 517 aaPredicted RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 ZFP14Q9HCL3 533 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 CEP72Q9P209 647 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 STK17AQ9UEE5 414 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
CDX1-202ENST00000616154 DMXL1Q9Y485 3027 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 TICRRQ7Z2Z1 1910 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 ANK1P16157 1881 aa20.6■□□□□ 0.89
CDX1-202ENST00000616154 NRG2O14511 850 aaPredicted RBP20.59■□□□□ 0.89
CDX1-202ENST00000616154 PIGRP01833 764 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 TNFSF9P41273 254 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 LIG4P49917 911 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 YWHAHQ04917 246 aaPredicted RBP20.59■□□□□ 0.89
CDX1-202ENST00000616154 TWF1Q12792 350 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 ZNF852Q6ZMS4 543 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 RNF19BQ6ZMZ0 732 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 GPBP1Q86WP2 473 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 TMEM130Q8N3G9 435 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 SPRYD3Q8NCJ5 442 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 BORCS6Q96GS4 357 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 TSPAN18Q96SJ8 248 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 HEBP1Q9NRV9 189 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 MRPS17Q9Y2R5 130 aaKnown RBP20.59■□□□□ 0.89
CDX1-202ENST00000616154 GPR179Q6PRD1 2367 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 CEP250Q9BV73 2442 aa20.59■□□□□ 0.89
CDX1-202ENST00000616154 TSC2P49815 1807 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 SHISA7A6NL88 538 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 HNRNPDLO14979 420 aaKnown RBP20.58■□□□□ 0.89
CDX1-202ENST00000616154 NCAM2O15394 837 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 XPOTO43592 962 aaKnown RBP20.58■□□□□ 0.89
CDX1-202ENST00000616154 FAM189A1O60320 539 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 MOSPD3O75425 235 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 RPS9P46781 194 aaKnown RBP20.58■□□□□ 0.89
CDX1-202ENST00000616154 MCM6Q14566 821 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 ERMP1Q7Z2K6 904 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 HS6ST3Q8IZP7 471 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 SMARCD2Q92925 531 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 FIZ1Q96SL8 496 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 ASAH2Q9NR71 780 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 TBX20Q9UMR3 447 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 YIPF1Q9Y548 306 aa20.58■□□□□ 0.89
CDX1-202ENST00000616154 LACTBL1A8MY62 500 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 K7ENM7 598 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 OGTO15294 1046 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 KINO60870 393 aaKnown RBP20.57■□□□□ 0.88
CDX1-202ENST00000616154 VNN2O95498 520 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 ADRB2P07550 413 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 GRM2Q14416 872 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 ENOX2Q16206 610 aaKnown RBP20.57■□□□□ 0.88
CDX1-202ENST00000616154 KRI1Q8N9T8 703 aaKnown RBP20.57■□□□□ 0.88
CDX1-202ENST00000616154 SUMF1Q8NBK3 374 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 RUBCNQ92622 972 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 ZSWIM3Q96MP5 696 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 CLIC6Q96NY7 704 aa20.57■□□□□ 0.88
CDX1-202ENST00000616154 TRMT61BQ9BVS5 477 aaKnown RBP20.57■□□□□ 0.88
CDX1-202ENST00000616154 BRD9Q9H8M2 597 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms