RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 MICAL3Q7RTP6 2002 aa25.13■■□□□ 1.61
CCND3-223ENST00000616010 TIMP1P01033 207 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 CD58P19256 250 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 ACO1P21399 889 aaKnown RBP25.12■■□□□ 1.61
CCND3-223ENST00000616010 ZNF571Q7Z3V5 609 aaPredicted RBP25.12■■□□□ 1.61
CCND3-223ENST00000616010 ACRBPQ8NEB7 543 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 TMEM161AQ9NX61 479 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 ALPK3Q96L96 1907 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 KIAA0355O15063 1070 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 AKR1B10O60218 316 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 WEE2P0C1S8 567 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 FGFR1P11362 822 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 RAP1GAPP47736 663 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 TNNC1P63316 161 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 GLB1LQ6UWU2 654 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 SMYD3Q9H7B4 428 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 ACP6Q9NPH0 428 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 PCDH10Q9P2E7 1040 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 CACNG4Q9UBN1 327 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 PCDHB4Q9Y5E5 795 aa25.12■■□□□ 1.61
CCND3-223ENST00000616010 PIRO00625 290 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 OFD1O75665 1012 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 P4HA1P13674 534 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 RAG1P15918 1043 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 RFC2P35250 354 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 CLCN1P35523 988 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 GRIK3Q13003 919 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 ASTE1Q2TB18 679 aaPredicted RBP25.11■■□□□ 1.61
CCND3-223ENST00000616010 CLLU1OSQ5K130 101 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 TMEM270Q6UE05 265 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 FAM43BQ6ZT52 329 aaPredicted RBP25.11■■□□□ 1.61
CCND3-223ENST00000616010 SLC47A2Q86VL8 602 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 ZNF560Q96MR9 790 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 BCO2Q9BYV7 579 aa25.11■■□□□ 1.61
CCND3-223ENST00000616010 TRMT1Q9NXH9 659 aaKnown RBP25.11■■□□□ 1.61
CCND3-223ENST00000616010 USP27XA6NNY8 438 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 LRPAP1P30533 357 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 UBR7Q8N806 425 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.1■■□□□ 1.61
CCND3-223ENST00000616010 CISHQ9NSE2 258 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 PPP2R2CQ9Y2T4 447 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 ADGRG1Q9Y653 693 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 CCDC175P0C221 793 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 GFPT1Q06210 699 aaPredicted RBP25.1■■□□□ 1.61
CCND3-223ENST00000616010 CNKSR3Q6P9H4 555 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 CCAR2Q8N163 923 aaKnown RBP25.1■■□□□ 1.61
CCND3-223ENST00000616010 EPS8L1Q8TE68 723 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 VWCEQ96DN2 955 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 FAXDC2Q96IV6 333 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 MMS19Q96T76 1030 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 ELAC1Q9H777 363 aaKnown RBP25.1■■□□□ 1.61
CCND3-223ENST00000616010 PCDHB7Q9Y5E2 793 aa25.1■■□□□ 1.61
CCND3-223ENST00000616010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.09■■□□□ 1.61
CCND3-223ENST00000616010 CASTOR2A6NHX0 329 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 EIF3CLB5ME19 914 aaKnown RBP25.09■■□□□ 1.61
CCND3-223ENST00000616010 INPPL1O15357 1258 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 IPO7O95373 1038 aaKnown RBP25.09■■□□□ 1.61
CCND3-223ENST00000616010 PNPLA4P41247 253 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 PDE6CP51160 858 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 RBBP8NLQ8NC74 664 aaPredicted RBP25.09■■□□□ 1.61
CCND3-223ENST00000616010 EIF3CQ99613 913 aaKnown RBP25.09■■□□□ 1.61
CCND3-223ENST00000616010 SDCBP2Q9H190 292 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 ADAMTS1Q9UHI8 967 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 SNX9Q9Y5X1 595 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 TTC3P53804 2025 aa25.09■■□□□ 1.61
CCND3-223ENST00000616010 CSF2RAP15509 400 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 TAF6P49848 677 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 CDH8P55286 799 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 SLC20A1Q8WUM9 679 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.08■■□□□ 1.61
CCND3-223ENST00000616010 CYP11B1P15538 503 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 CLCNKBP51801 687 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 YWHAEP62258 255 aaKnown RBP25.08■■□□□ 1.61
CCND3-223ENST00000616010 CYP27A1Q02318 531 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 VPS36Q86VN1 386 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 LRFN2Q9ULH4 789 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 CNTN6Q9UQ52 1028 aa25.08■■□□□ 1.61
CCND3-223ENST00000616010 REXO2Q9Y3B8 237 aaKnown RBP25.08■■□□□ 1.61
CCND3-223ENST00000616010 ZNF263O14978 683 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 SPTLC1O15269 473 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 CALCAP01258 141 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 IKBKEQ14164 716 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 SLC18A3Q16572 532 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 SV2CQ496J9 727 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 NOMO2Q5JPE7 1267 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 NOP9Q86U38 636 aaKnown RBP25.07■■□□□ 1.6
CCND3-223ENST00000616010 URGCPQ8TCY9 931 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 SYT11Q9BT88 431 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 NOCTQ9UK39 431 aaKnown RBP25.07■■□□□ 1.6
CCND3-223ENST00000616010 A0A087X0T9 212 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 PODXLO00592 558 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 ZSCAN12O43309 604 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 FAM228BP0C875 321 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 SPA17Q15506 151 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 ZNF394Q53GI3 561 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 MFSD5Q6N075 450 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 PPP1R13BQ96KQ4 1090 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 PAAF1Q9BRP4 392 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 CYP3A43Q9HB55 503 aa25.07■■□□□ 1.6
CCND3-223ENST00000616010 LTBP2Q14767 1821 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms