RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GLI2P10070 1586 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 MYL2P10916 166 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 HLA-DPA1P20036 260 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 WLSQ5T9L3 541 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 IFNEQ86WN2 208 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 ZNF341Q9BYN7 854 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 RUBCNLQ9H714 662 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 ARHGAP20Q9P2F6 1191 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 F5H6K3 240 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 KLRC3Q07444 240 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 DUOXA2Q1HG44 320 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 PRUNE1Q86TP1 453 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 TMEM247A6NEH6 219 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 FAM196BA6NMK8 535 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 SWSAP1Q6NVH7 229 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 FAM167AQ96KS9 214 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 TASP1Q9H6P5 420 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 MRGBPQ9NV56 204 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 WHRNQ9P202 907 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 PAK5Q9P286 719 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 KRT16P08779 473 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 DSTYKQ6XUX3 929 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 HDAC7Q8WUI4 952 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 TBX2Q13207 712 aaPredicted RBP19.75■□□□□ 0.75
SPAST-203ENST00000615843 WASHC2DQ5SRD0 308 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 GPR141Q7Z602 305 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 TTC39CQ8N584 583 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 CELF1Q92879 486 aaKnown RBP19.75■□□□□ 0.75
SPAST-203ENST00000615843 EHD4Q9H223 541 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 FAM217BQ9NTX9 383 aaPredicted RBP19.75■□□□□ 0.75
SPAST-203ENST00000615843 AIPL1Q9NZN9 384 aa19.75■□□□□ 0.75
SPAST-203ENST00000615843 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 RPS6P62753 249 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 ZC3H12BQ5HYM0 836 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 WDR35Q9P2L0 1181 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 GTF3C4Q9UKN8 822 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 CDC42BPBQ9Y5S2 1711 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 CLPTM1O96005 669 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 NUDT2P50583 147 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 FXR2P51116 673 aaKnown RBP eCLIP19.74■□□□□ 0.75
SPAST-203ENST00000615843 DEFA1P59665 94 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 DEFA3P59666 94 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 SNRNP35Q16560 246 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 ZC2HC1CQ53FD0 456 aaPredicted RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 AP4S1Q9Y587 144 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 AKR1B1P15121 316 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 KCNQ4P56696 695 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 RBBP8NLQ8NC74 664 aaPredicted RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 FAM84BQ96KN1 310 aaPredicted RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 MRPL4Q9BYD3 311 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 HERC5Q9UII4 1024 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 PCDHB2Q9Y5E7 798 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 MADDQ8WXG6 1647 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 ZSCAN5CA6NGD5 496 aaPredicted RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 WDR47O94967 919 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 NPEPPSP55786 919 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 CD209Q9NNX6 404 aa19.74■□□□□ 0.75
SPAST-203ENST00000615843 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
SPAST-203ENST00000615843 CST8O60676 142 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 IFNA8P32881 189 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 CCDC15Q0P6D6 951 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ZNF786Q8N393 782 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 SARS2Q9NP81 518 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 FEM1BQ9UK73 627 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 LRCH1Q9Y2L9 728 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 SPRP35270 261 aaPredicted RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 TOB1P50616 345 aaPredicted RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 MRPL28Q13084 256 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 USP10Q14694 798 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 RBBP7Q16576 425 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 TRIM60Q495X7 471 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 NLGN1Q8N2Q7 840 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 SPATA18Q8TC71 538 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 INPP5DQ92835 1189 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ZNF335Q9H4Z2 1342 aaPredicted RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 EIF3DO15371 548 aaKnown RBP eCLIP19.73■□□□□ 0.75
SPAST-203ENST00000615843 FAM153BP0C7A2 387 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 RBP3P10745 1247 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ZNF844Q08AG5 666 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 NME3Q13232 169 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 TRIM28Q13263 835 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 LBRQ14739 615 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 Q3C1V9 767 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 FAM153CQ494X1 144 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 MROH9Q5TGP6 573 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ARHGAP22Q7Z5H3 698 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 NSUN4Q96CB9 384 aaKnown RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 ZNF512BQ96KM6 892 aaPredicted RBP19.73■□□□□ 0.75
SPAST-203ENST00000615843 FAM153AQ9UHL3 310 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ARHGEF37A1IGU5 675 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 TBX3O15119 743 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 VCAM1P19320 739 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 ATG4AQ8WYN0 398 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 CNDP1Q96KN2 507 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 KLHL4Q9C0H6 718 aa19.73■□□□□ 0.75
SPAST-203ENST00000615843 NBPF26B4DH59 902 aa19.72■□□□□ 0.75
SPAST-203ENST00000615843 CDH2P19022 906 aaPredicted RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 NKX1-1Q15270 411 aaPredicted RBP19.72■□□□□ 0.75
SPAST-203ENST00000615843 CATSPER4Q7RTX7 472 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms