RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CD302Q8IX05 232 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 CMTR2Q8IYT2 770 aaKnown RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 TC2NQ8N9U0 490 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 FBXL13Q8NEE6 735 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 BAP1Q92560 729 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 HLA-CQ95604 372 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 ANKRD36BP1Q96IX9 119 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 XYLT2Q9H1B5 865 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 RSAD1Q9HA92 442 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PLEKHA5Q9HAU0 1116 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 C1orf112Q9NSG2 853 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 HCSTQ9UBK5 93 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 GIT1Q9Y2X7 761 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 DERAQ9Y315 318 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 RWDD3Q9Y3V2 267 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 C2CD2Q9Y426 696 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 INPPL1O15357 1258 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 POMCP01189 267 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 TNNC2P02585 160 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 ITGB3P05106 788 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 PNMA6AP0CW24 399 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 CASP14P31944 242 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 CTNNB1P35222 781 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 KCNQ1P51787 676 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 POLR2FP61218 127 aaKnown RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 NCOA4Q13772 614 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 FIGNQ5HY92 759 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 IQCEQ6IPM2 695 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 PDXDC1Q6P996 788 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 CCDC186Q7Z3E2 898 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 USP37Q86T82 979 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 DRC7Q8IY82 874 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 NEK11Q8NG66 645 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 ADAMTS19Q8TE59 1207 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 ARID3AQ99856 593 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 C11orf84Q9BUA3 381 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 NAA15Q9BXJ9 866 aaKnown RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 GPR88Q9GZN0 384 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 ELAC1Q9H777 363 aaKnown RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 NLRC4Q9NPP4 1024 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 RAB20Q9NX57 234 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 TMEM161AQ9NX61 479 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 DPP3Q9NY33 737 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 LRFN2Q9ULH4 789 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 POLIQ9UNA4 740 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 INPP5FQ9Y2H2 1132 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.02
PCDH9-205ENST00000614931 MRPL42Q9Y6G3 142 aaKnown RBP8.65□□□□□ -1.02
PCDH9-205ENST00000614931 A0A1W2PQJ5 194 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 ANO9A1A5B4 782 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 F8W810 466 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 TNFRSF10AO00220 468 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 GRM6O15303 877 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 MFAP3LO75121 409 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PHACTR2O75167 634 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 EOMESO95936 686 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
PCDH9-205ENST00000614931 SKIP12755 728 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 UCHL3P15374 230 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 AP3M2P53677 418 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 ADKP55263 362 aaKnown RBP8.64□□□□□ -1.03
PCDH9-205ENST00000614931 JAM2P57087 298 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 NOP14P78316 857 aaKnown RBP8.64□□□□□ -1.03
PCDH9-205ENST00000614931 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 TIGD5Q53EQ6 642 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 C9orf57Q5W0N0 161 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 CD300LGQ6UXG3 332 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 RRAGAQ7L523 313 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 NT5DC4Q86YG4 428 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 TMEM139Q8IV31 216 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 HACE1Q8IYU2 909 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PIAS4Q8N2W9 510 aaPredicted RBP8.64□□□□□ -1.03
PCDH9-205ENST00000614931 UBR7Q8N806 425 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 C3orf58Q8NDZ4 430 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PGBD4Q96DM1 585 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 CASD1Q96PB1 797 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PAAF1Q9BRP4 392 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 LMAN2LQ9H0V9 348 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 SDCBP2Q9H190 292 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 KCNF1Q9H3M0 494 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 CEP72Q9P209 647 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 DNAJC12Q9UKB3 198 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 ITGA11Q9UKX5 1188 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 UBQLN1Q9UMX0 589 aaKnown RBP8.64□□□□□ -1.03
PCDH9-205ENST00000614931 AGAP1Q9UPQ3 857 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PCDHB7Q9Y5E2 793 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms