RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PIRO00625 290 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
CPNE3-208ENST00000614678 CALCAP01258 141 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 PRCPP42785 496 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 ADCY1Q08828 1119 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 DCLRE1AQ6PJP8 1040 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 CSGALNACT2Q8N6G5 542 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 SCAND2PQ9GZW5 306 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-208ENST00000614678 TMEM30AQ9NV96 361 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 AGAP1Q9UPQ3 857 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 ATG2BQ96BY7 2078 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 TBC1D4O60343 1298 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 AKAP3O75969 853 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 GAP43P17677 238 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 HOXC13P31276 330 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 CDH8P55286 799 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 POSTNQ15063 836 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 SNRNP35Q16560 246 aaKnown RBP6.17□□□□□ -1.42
CPNE3-208ENST00000614678 RNF135Q8IUD6 432 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 TMEM87AQ8NBN3 555 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 KREMEN2Q8NCW0 462 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 SENP8Q96LD8 212 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 MYADMQ96S97 322 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 RXFP1Q9HBX9 757 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 SDK1Q7Z5N4 2213 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 ANO9A1A5B4 782 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 SPDYE4A6NLX3 237 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 STX17P56962 302 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 PSMC1P62191 440 aaKnown RBP6.17□□□□□ -1.42
CPNE3-208ENST00000614678 KNOP1Q1ED39 458 aaKnown RBP6.17□□□□□ -1.42
CPNE3-208ENST00000614678 HSP90AA4PQ58FG1 418 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 HACE1Q8IYU2 909 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 PIK3R5Q8WYR1 880 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 DPEP3Q9H4B8 488 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 CEP72Q9P209 647 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 HMGXB4Q9UGU5 601 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 L1RE1Q9UN81 338 aa6.17□□□□□ -1.42
CPNE3-208ENST00000614678 A0A1W2PQ27 194 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 A0A1W2PQ64 194 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 A0A1W2PQD8 194 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 LRRIQ3A6PVS8 624 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 TNFRSF10AO00220 468 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 GLUD1P00367 558 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 C8AP07357 584 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CACNA2D1P54289 1103 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 NUCB2P80303 420 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 DUSP4Q13115 394 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 MRPL58Q14197 206 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CTXN3Q4LDR2 81 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 KLHL10Q6JEL2 608 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 TMEM184AQ6ZMB5 413 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 GPD1LQ8N335 351 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 EXOC1Q9NV70 894 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 DNMT3BQ9UBC3 853 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 MTRRQ9UBK8 725 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CELSR3Q9NYQ7 3312 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 EXTL3O43909 919 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 VNN1O95497 513 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 PDGFRBP09619 1106 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 PDIA4P13667 645 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 APBA1Q02410 837 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SMAD4Q13485 552 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CSPP1Q1MSJ5 1256 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 ATL3Q6DD88 541 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SCARA5Q6ZMJ2 495 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SUSD3Q96L08 255 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SEL1LQ9UBV2 794 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 ZFHX2Q9C0A1 2572 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 LRPAP1P30533 357 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 MYL6P60660 151 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SOWAHAQ2M3V2 549 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 ANKRD40Q6AI12 368 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 CNNM4Q6P4Q7 775 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 DSTYKQ6XUX3 929 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 GET4Q7L5D6 327 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 KCTD17Q8N5Z5 321 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 FGF14Q92915 247 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 MRPL45Q9BRJ2 306 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SMG9Q9H0W8 520 aaKnown RBP6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SDCBP2Q9H190 292 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 SNX9Q9Y5X1 595 aa6.16□□□□□ -1.42
CPNE3-208ENST00000614678 ZNF318Q5VUA4 2279 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 ANTXRLA6NF34 631 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 CYB561D2O14569 222 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
CPNE3-208ENST00000614678 RHOBTB3O94955 611 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 ADH1AP07327 375 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 AARSP49588 968 aaKnown RBP eCLIP6.15□□□□□ -1.42
CPNE3-208ENST00000614678 CYP24A1Q07973 514 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 ADHFE1Q8IWW8 467 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 PDCL2Q8N4E4 241 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 GPT2Q8TD30 523 aa6.15□□□□□ -1.42
CPNE3-208ENST00000614678 KBTBD7Q8WVZ9 684 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms