RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CNTN3Q9P232 1028 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 PRKAG3Q9UGI9 489 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 IPPQ9Y573 584 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 MGEA5O60502 916 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 ZC3H11AO75152 810 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 RECQL4O94761 1208 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 NOL4O94818 638 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 SLC9A1P19634 815 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 ALKAL1Q6UXT8 129 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 MRPL10Q7Z7H8 261 aaKnown RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 APBB2Q92870 758 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 ANKRD36BP1Q96IX9 119 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 FAM207AQ9NSI2 230 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
SLIRP-212ENST00000613856 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
SLIRP-212ENST00000613856 PLXNA4Q9HCM2 1894 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 A0A0U1RQF3 1178 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 EPHB6O15197 1021 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 EFCAB14O75071 495 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 TNNC2P02585 160 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 NFICP08651 508 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 KCNE1P15382 129 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 FECHP22830 423 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 CASP14P31944 242 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
SLIRP-212ENST00000613856 ZBED6P86452 979 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 CAMK1Q14012 370 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 TMEM132DQ14C87 1099 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 KLHDC7AQ5VTJ3 777 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 LMBRD2Q68DH5 695 aaPredicted RBP12.31□□□□□ -0.44
SLIRP-212ENST00000613856 SMYD5Q6GMV2 418 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 JADE1Q6IE81 842 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 CACTINQ8WUQ7 758 aaKnown RBP12.31□□□□□ -0.44
SLIRP-212ENST00000613856 BAP1Q92560 729 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 PANX2Q96RD6 677 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 MTMR12Q9C0I1 747 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 IGFLR1Q9H665 355 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 RGS18Q9NS28 235 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 C1orf112Q9NSG2 853 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 RAB20Q9NX57 234 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 MYO6Q9UM54 1294 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 LUC7L2Q9Y383 392 aaKnown RBP12.31□□□□□ -0.44
SLIRP-212ENST00000613856 HES2Q9Y543 173 aa12.31□□□□□ -0.44
SLIRP-212ENST00000613856 TTC3P53804 2025 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 VNN1O95497 513 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ITGA4P13612 1032 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 UCHL3P15374 230 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 CTNNB1P35222 781 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 KRT9P35527 623 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 PIK3CAP42336 1068 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 TFAMQ00059 246 aaKnown RBP12.3□□□□□ -0.44
SLIRP-212ENST00000613856 BIRC3Q13489 604 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ADGRD2Q7Z7M1 963 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-212ENST00000613856 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 SEPT8Q92599 483 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 EDAQ92838 391 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 SEMA4DQ92854 862 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ADAM2Q99965 735 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 NAA15Q9BXJ9 866 aaKnown RBP12.3□□□□□ -0.44
SLIRP-212ENST00000613856 NUCKS1Q9H1E3 243 aaKnown RBP12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ABHD10Q9NUJ1 306 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 ITGA11Q9UKX5 1188 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 GIT1Q9Y2X7 761 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
SLIRP-212ENST00000613856 SCN1AP35498 2009 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 TMEM221A6NGB7 291 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 C9IYK1 514 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 RNF225M0QZC1 329 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 M0R296 226 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 INPPL1O15357 1258 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 ATF7P17544 494 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-212ENST00000613856 AKAP5P24588 427 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 DNAJB1P25685 340 aa12.29□□□□□ -0.44
SLIRP-212ENST00000613856 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms