RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 PCDHB12Q9Y5F1 795 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 NOX1Q9Y5S8 564 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 STON1Q9Y6Q2 735 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 RTL1A6NKG5 1358 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 PLEKHG1Q9ULL1 1385 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 CCDC88BA6NC98 1476 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
CCL16-206ENST00000613642 PRDM15P57071 1507 aaPredicted RBP5.88□□□□□ -1.47
CCL16-206ENST00000613642 A0A088AWK7 358 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 SH3D21A4FU49 640 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 DPPA5A6NC42 116 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CCDC69A6NI79 296 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 IRS4O14654 1257 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 NCK2O43639 380 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 STX10O60499 249 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 SERPINB7O75635 380 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 MICAL2O94851 1124 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ANP32DO95626 131 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 SCGB1D2O95969 90 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 IFNA14P01570 189 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CHRNA1P02708 482 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LTA4HP09960 611 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 GARTP22102 1010 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CCND1P24385 295 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 IFNA8P32881 189 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LONP1P36776 959 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 HTR3AP46098 478 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 NOP14P78316 857 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 EXOSC9Q06265 439 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 MYO1EQ12965 1108 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LSAMPQ13449 338 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 TRPC3Q13507 836 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PPP2R5DQ14738 602 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 TTF1Q15361 905 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 TSC22D1Q15714 1073 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LONRF2Q1L5Z9 754 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CWF19L2Q2TBE0 894 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 P3H1Q32P28 736 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 TCTE1Q5JU00 501 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PHLDB3Q6NSJ2 640 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LIMS2Q7Z4I7 341 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 FAM228AQ86W67 206 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 GLYCTKQ8IVS8 523 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CNTROBQ8N137 903 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 DTWD1Q8N5C7 304 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ATAD1Q8NBU5 361 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PPFIBP2Q8ND30 876 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 GOT1L1Q8NHS2 421 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 RFWD2Q8NHY2 731 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CALML6Q8TD86 181 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 UTP15Q8TED0 518 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 PTPRN2Q92932 1015 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 AZIN2Q96A70 460 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PNMA5Q96PV4 448 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 HAPLN3Q96S86 360 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CRBNQ96SW2 442 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 CENPKQ9BS16 269 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 C9orf16Q9BUW7 83 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 UNKQ9C0B0 810 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PDE11AQ9HCR9 933 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ABCB6Q9NP58 842 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 SAMSN1Q9NSI8 373 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 ANKEF1Q9NU02 776 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 GID8Q9NWU2 228 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 PAQR5Q9NXK6 330 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 HACD3Q9P035 362 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 LARSQ9P2J5 1176 aaKnown RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 EXTL2Q9UBQ6 330 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 VTI1BQ9UEU0 232 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ATP6V1HQ9UI12 483 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 DNAJC16Q9Y2G8 782 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ZNF335Q9H4Z2 1342 aaPredicted RBP5.87□□□□□ -1.47
CCL16-206ENST00000613642 SBNO1A3KN83 1393 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 GRIN2BQ13224 1484 aa5.87□□□□□ -1.47
CCL16-206ENST00000613642 ANKRD30AQ9BXX3 1397 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 ITIH6Q6UXX5 1313 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 A0A0J9YVX5 310 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 PNMA6FA0A0J9YX94 578 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 LOC100653049A0A140TA62 436 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 KLRG2A4D1S0 409 aaPredicted RBP5.86□□□□□ -1.47
CCL16-206ENST00000613642 ANKRD34BA5PLL1 514 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 CFAP73A6NFT4 308 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 LRRIQ4A6NIV6 560 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 SLC9B1P1A6NJY1 282 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 BECN2A8MW95 431 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 J3KRW8 73 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 XPO1O14980 1071 aaKnown RBP5.86□□□□□ -1.47
CCL16-206ENST00000613642 RAD51BO15315 384 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 EIF3HO15372 352 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCL16-206ENST00000613642 HYAL3O43820 417 aaPredicted RBP5.86□□□□□ -1.47
CCL16-206ENST00000613642 NBNO60934 754 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 MAFO75444 373 aaPredicted RBP5.86□□□□□ -1.47
CCL16-206ENST00000613642 CRTAPO75718 401 aaPredicted RBP5.86□□□□□ -1.47
CCL16-206ENST00000613642 KRT34O76011 436 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 ALDH1A2O94788 518 aa5.86□□□□□ -1.47
CCL16-206ENST00000613642 KLHL2O95198 593 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms