RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
GRIA3-205ENST00000611689 VPS16Q9H269 839 aa16.72■□□□□ 0.27
GRIA3-205ENST00000611689 TTYH1Q9H313 450 aaPredicted RBP16.72■□□□□ 0.27
GRIA3-205ENST00000611689 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
GRIA3-205ENST00000611689 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
GRIA3-205ENST00000611689 RAB20Q9NX57 234 aa16.72■□□□□ 0.27
GRIA3-205ENST00000611689 LZTS1Q9Y250 596 aa16.72■□□□□ 0.27
GRIA3-205ENST00000611689 SF3B1O75533 1304 aaKnown RBP eCLIP16.71■□□□□ 0.27
GRIA3-205ENST00000611689 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 EPOPA6NHQ4 379 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 KPNA7A9QM74 516 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 GRM6O15303 877 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 LRRN2O75325 713 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 UBE3AQ05086 875 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 ELAVL2Q12926 359 aaKnown RBP16.71■□□□□ 0.27
GRIA3-205ENST00000611689 SV2CQ496J9 727 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 RNF168Q8IYW5 571 aaPredicted RBP16.71■□□□□ 0.27
GRIA3-205ENST00000611689 TAF4BQ92750 862 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 SUSD3Q96L08 255 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 VRTNQ9H8Y1 702 aa16.71■□□□□ 0.27
GRIA3-205ENST00000611689 PUF60Q9UHX1 559 aaKnown RBP16.71■□□□□ 0.27
GRIA3-205ENST00000611689 KIAA1671Q9BY89 1806 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 M0QZQ0 153 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 RFXAPO00287 272 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
GRIA3-205ENST00000611689 SOD2P04179 222 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 TPM2P07951 284 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 DNAJB1P25685 340 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 CETN1Q12798 172 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 FAM171A1Q5VUB5 890 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 DSTYKQ6XUX3 929 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 EHBP1Q8NDI1 1231 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 PI4K2AQ9BTU6 479 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 CHST7Q9NS84 486 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 GDAP2Q9NXN4 497 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 STK39Q9UEW8 545 aa16.7■□□□□ 0.26
GRIA3-205ENST00000611689 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
GRIA3-205ENST00000611689 CYB561D2O14569 222 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 FGFR3P22607 806 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 CAMK1Q14012 370 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 GDPD5Q8WTR4 605 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 POF1BQ8WVV4 589 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 B3GALT6Q96L58 329 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 HERC2P3Q9BVR0 1158 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 APOBEC3GQ9HC16 384 aaKnown RBP16.69■□□□□ 0.26
GRIA3-205ENST00000611689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.26
GRIA3-205ENST00000611689 PCDHB8Q9UN66 801 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
GRIA3-205ENST00000611689 LAMA2P24043 3122 aaKnown RBP16.69■□□□□ 0.26
GRIA3-205ENST00000611689 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
GRIA3-205ENST00000611689 SYN3O14994 580 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 LPXNO60711 386 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
GRIA3-205ENST00000611689 ERVFC1P60507 584 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 ZNF667Q5HYK9 610 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 WDR44Q5JSH3 913 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
GRIA3-205ENST00000611689 GBP6Q6ZN66 633 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 CCDC150Q8NCX0 1101 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 TTPALQ9BTX7 342 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 LMAN2LQ9H0V9 348 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 ZBP1Q9H171 429 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
GRIA3-205ENST00000611689 POLIQ9UNA4 740 aa16.68■□□□□ 0.26
GRIA3-205ENST00000611689 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
GRIA3-205ENST00000611689 LGALS16A8MUM7 142 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 HUS1O60921 280 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 SERPINC1P01008 464 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 CYP11A1P05108 521 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 CTSAP10619 480 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 ODC1P11926 461 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 TYMPP19971 482 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 TNNC1P63316 161 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
GRIA3-205ENST00000611689 FANCCQ00597 558 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 DSG1Q02413 1049 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 SOWAHAQ2M3V2 549 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 KIAA0319Q5VV43 1072 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 DPH6Q7L8W6 267 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 CEP57Q86XR8 500 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 TOP6BLQ8N6T0 577 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 APPL2Q8NEU8 664 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 TATDN2Q93075 761 aa16.67■□□□□ 0.26
GRIA3-205ENST00000611689 NAP1L5Q96NT1 182 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms